Miyakogusa Predicted Gene

Lj5g3v1340870.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1340870.1 Non Chatacterized Hit- tr|D7FGX7|D7FGX7_ECTSI
Putative uncharacterized protein OS=Ectocarpus
silicul,41.18,3e-16,SUBFAMILY NOT NAMED,NULL; THYROID RECEPTOR
INTERACTING PROTEIN RELATED,NULL; no description,NULL,CUFF.55158.1
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75180 similar to UniRef100_A7QMS9 Cluster: Chromosome...   902   0.0  

>gnl|LJGI|TC75180 similar to UniRef100_A7QMS9 Cluster: Chromosome undetermined
           scaffold_127, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_127,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (67%)
          Length = 1497

 Score =  902 bits (455), Expect = 0.0
 Identities = 458/459 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagtatttctacaaggagatttatgctctcaatgggatcactgatatcaattttcct 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 311 atggagtatttctacaaggagatttatactctcaatgggatcactgatatcaattttcct 370

                                                                       
Query: 61  caacattatccagtttctaggctattgggttgtgttgaagtggttggttgtttaaaacgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 caacattatccagtttctaggctattgggttgtgttgaagtggttggttgtttaaaacgc 430

                                                                       
Query: 121 gaggagctagcttcatgggagatggttcctgaaggggtgaggctggaagcacaaactgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaggagctagcttcatgggagatggttcctgaaggggtgaggctggaagcacaaactgat 490

                                                                       
Query: 181 ttttgctggctatgtgaacagccacagaaattgttgattccatttgagatgcgaggatac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttttgctggctatgtgaacagccacagaaattgttgattccatttgagatgcgaggatac 550

                                                                       
Query: 241 cagggtgtttataacttggaaaggaagatctatgaagctgctgttagaggtctatctcca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 cagggtgtttataacttggaaaggaagatctatgaagctgctgttagaggtctatctcca 610

                                                                       
Query: 301 gttgatagtccgttgccggtgaaatttccacttccagatccacgtgatccattttcgctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gttgatagtccgttgccggtgaaatttccacttccagatccacgtgatccattttcgctg 670

                                                                       
Query: 361 aggccgggtcgtatcgctgcccttactcctaatttaaaagcaactgaagtggacaaatca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aggccgggtcgtatcgctgcccttactcctaatttaaaagcaactgaagtggacaaatca 730

                                                  
Query: 421 tcaagtgtaagtctggccatagctggggcacgagcggcg 459
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tcaagtgtaagtctggccatagctggggcacgagcggcg 769