Miyakogusa Predicted Gene
- Lj5g3v1330840.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1330840.1 Non Chatacterized Hit- tr|H9VC00|H9VC00_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,76.27,7e-17,seg,NULL,CUFF.55152.1
(1176 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68170 similar to UniRef100_A7QMS2 Cluster: Chromosome... 1229 0.0
gnl|LJGI|AV774296 similar to UniRef100_A7QMS2 Cluster: Chromosom... 379 e-104
>gnl|LJGI|TC68170 similar to UniRef100_A7QMS2 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (41%)
Length = 770
Score = 1229 bits (620), Expect = 0.0
Identities = 655/670 (97%), Gaps = 1/670 (0%)
Strand = Plus / Plus
Query: 1 atggcagacgatttgtttgaaggattgcctcctccatcttccgccactctccttcctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atggcagacgatttgtttgaaggattgcctcctccatcttccgccactctccttcctcaa 160
Query: 61 ccaccgccatctccgccaattgtctcggttcccaccgctgcagttcccgcaccaaagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 ccaccgccatctccgccaattgtctcggttcccaccgctgcagttcccgcaccaaagcca 220
Query: 121 atcctcaaaagttctctcaagcgccctaaccctactccaaccgaaacccaagatacagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 atcctcaaaagttctctcaagcgccctaaccctactccaaccgaaacccaagatacagca 280
Query: 181 cctnnnnnnngcttgaagtttaaactcacgactgatgcttccgaagcgcaagttattgag 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cctaaaaaaagcttgaagtttaaactcacgactgatgcttccgaagcgcaagttattgag 340
Query: 241 gcaatgcagaagatatcttcacacatcaagaaccctgcaaagttcagcaaggctgccaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gcaatgcagaagatatcttcacacatcaagaaccctgcaaagttcagcaaggctgccaag 400
Query: 301 cttgctatacagctggttcaagcaggaagtgttacgtctagcgttagtgattannnnnnn 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cttgctatacagctggttcaagcaggaagtgttacgtctagcgttagtgattattttttt 460
Query: 361 gccatattagaagctgcaatgtcatcatcatcccaacattgtactgatccttcagtgcgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gccatattagaagctgcaatgtcatcatcatcccaacattgtactgatccttcagtgcgg 520
Query: 421 gcagattatcatgctctgttcgaagtagcacaagacatcaaagaacacctcgataagaa- 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gcagattatcatgctctgttcgaagtagcacaagacatcaaagaacacctcgataagaaa 580
Query: 480 gcaaaagaatcaactggcaacatggacaattaatgccgtggtagcaaatgatttatatac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gcaaaagaatcaactggcaacatggacaattaatgccgtggtagcaaatgatttatatac 640
Query: 540 agatgacagctttgtgttttctagagcagctggaaaaatcaaggaagctatatctaacct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agatgacagctttgtgttttctagagcagctggaaaaatcaaggaagctatatctaacct 700
Query: 600 tcctgtagcaacagaggaggaagacaaagatgaagcaacgtctctgaaagatagcacagt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tcctgtagcaacagaggaggaagacaaagatgaagcaacgtctctgaaagatagcacagt 760
Query: 660 tttggtaggt 669
||||||||||
Sbjct: 761 tttggtaggt 770
>gnl|LJGI|AV774296 similar to UniRef100_A7QMS2 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(18%)
Length = 444
Score = 379 bits (191), Expect = e-104
Identities = 216/223 (96%), Gaps = 1/223 (0%)
Strand = Plus / Minus
Query: 955 aatgtggcaagatttacagctcatcagagggatgctgtagggaaattgtgggcttccatt 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatgtggcaagatttacagctcatcagagggatgctgtagggaaattgtgggcttccatt 385
Query: 1015 agagagcaacaaacacgtcggaagcaagggaagtcagttaatggaaaacttgatgtaaat 1074
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agagagcgacctacacgtcggaagcaagggaagtcagttaatggaaaacttgatgtaaat 325
Query: 1075 gcctttgaatatcttcaagaaaaatatgctaatgagaagattagcattcgacattctgtg 1134
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 324 gcctttgcatatcttcaagaaaaatatgctaatgagaagattagcattcgacattctctg 265
Query: 1135 ggaggtagcggggaccgaaaagccacacaatg-gcttggttaa 1176
||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 264 ggaggtagcggggaccgaaaagccacacactgcgcttggttaa 222