Miyakogusa Predicted Gene
- Lj5g3v1327750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1327750.1 Non Chatacterized Hit- tr|Q10XM9|Q10XM9_TRIEI
Putative uncharacterized protein OS=Trichodesmium
eryt,25.07,2e-18,seg,NULL,CUFF.55537.1
(1320 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67240 similar to UniRef100_A7QMS5 Cluster: Chromosome... 1066 0.0
gnl|LJGI|TC73171 similar to UniRef100_A7QMS5 Cluster: Chromosome... 934 0.0
gnl|LJGI|BP030375 similar to UniRef100_A7QMS5 Cluster: Chromosom... 246 3e-64
gnl|LJGI|BP041121 64 2e-09
>gnl|LJGI|TC67240 similar to UniRef100_A7QMS5 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (34%)
Length = 827
Score = 1066 bits (538), Expect = 0.0
Identities = 576/595 (96%)
Strand = Plus / Plus
Query: 109 tccgcttcctcaaacccaaggcagcagcagaaacaaccgcagcagcaagtgtaccaacca 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tccgcttcctcaaacccaaggcagcagcagaaacaaccgcagcagcaagtgtaccaacca 292
Query: 169 ttccggccaccgtcatcccctcttccaccccacctcagaaccctcgatatcccgggccaa 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ttccggccaccgtcatcccctcttccaccccacctcagaaccctcgatatcccgggccaa 352
Query: 229 atcgacatcctcgccaaccgcctcggcgtctggcacgagtacgccccattaatctcctcc 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atcgacatcctcgccaaccgcctcggcgtctggcacgagtacgccccattaatctcctcc 412
Query: 289 ctcatccgcgaaggcttcacccctcccaccatcgaggaactcaccggcatcaccggcgtc 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ctcatccgcgaaggcttcacccctcccaccatcgaggaactcaccggcatcaccggcgtc 472
Query: 349 gagcagaatcgcttcatcgtcgccgcccaggtccgcgactcgctcctccagtccaacacc 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gagcagaatcgcttcatcgtcgccgcccaggtccgcgactcgctcctccagtccaacacc 532
Query: 409 gaccccgacttggtttccttcttcgacaacggcggcgccgagcttctctaccagatccgc 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gaccccgacttggtttccttcttcgacaacggcggcgccgagcttctctaccagatccgc 592
Query: 469 ctcctcagcgcctcccannnnnnnnnnnnnnnnnnnttcatcgtcgagaacaagagcgac 528
||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 593 ctcctcagcgcctcccagcgcgccgccgccgcgcgcttcatcgtcgagaacaagagcgac 652
Query: 529 ggaaagggcgcgaatgagctcgcgcgctccatgaaggatttcccgagccgaagaggggag 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ggaaagggcgcgaatgagctcgcgcgctccatgaaggatttcccgagccgaagaggggag 712
Query: 589 aaggggtgggagtcgtttgactacaatctccccggagattgcctctccttcatgtactac 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 aaggggtgggagtcgtttgactacaatctccccggagattgcctctccttcatgtactac 772
Query: 649 cgcctgagcagggagtacaaccggaaccccgagcagagagactccgtgctggaac 703
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 cgcctgagcagggagtacaaccggaaccccgagcagagagactccgtgctggaac 827
Score = 93.7 bits (47), Expect = 3e-18
Identities = 47/47 (100%)
Strand = Plus / Plus
Query: 1 atgctctccctctcaccatgtctcactgcaaacacactcacactcaa 47
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atgctctccctctcaccatgtctcactgcaaacacactcacactcaa 171
>gnl|LJGI|TC73171 similar to UniRef100_A7QMS5 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(34%)
Length = 764
Score = 934 bits (471), Expect = 0.0
Identities = 471/471 (100%)
Strand = Plus / Plus
Query: 850 gccgcagcgagctcggtggtggtgctgccggtgtgtaatgcggatgaagggggtgatgcc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccgcagcgagctcggtggtggtgctgccggtgtgtaatgcggatgaagggggtgatgcc 60
Query: 910 attttggaagcgccgtctgagtgtagaactgttggggagtttggtgtggtggtggcggag 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attttggaagcgccgtctgagtgtagaactgttggggagtttggtgtggtggtggcggag 120
Query: 970 aaagggtgggagaagtgggtggttttgccagggtgggagcctttggtggaattagggaaa 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagggtgggagaagtgggtggttttgccagggtgggagcctttggtggaattagggaaa 180
Query: 1030 gggtgtgttgtggtgtcgtttgtggatgcgagggtgttgccgtggaaggcgaaccggtgg 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gggtgtgttgtggtgtcgtttgtggatgcgagggtgttgccgtggaaggcgaaccggtgg 240
Query: 1090 tacaaggaggagcctatattggtggtggctgatcggagtaagagggaggtgggtgctgat 1149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tacaaggaggagcctatattggtggtggctgatcggagtaagagggaggtgggtgctgat 300
Query: 1150 gatgggttttatttggttaaggttgaggatgatggtgttggtttgaaggtggagaggggt 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgggttttatttggttaaggttgaggatgatggtgttggtttgaaggtggagaggggt 360
Query: 1210 ttgggtttgaaagaaagaggtgttagtgagagtttagggagtgtaattttggttgttagg 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttgggtttgaaagaaagaggtgttagtgagagtttagggagtgtaattttggttgttagg 420
Query: 1270 cctcccagagaagaggatgatggtcaattgagtgatgaagattgggattga 1320
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cctcccagagaagaggatgatggtcaattgagtgatgaagattgggattga 471
>gnl|LJGI|BP030375 similar to UniRef100_A7QMS5 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(6%)
Length = 419
Score = 246 bits (124), Expect = 3e-64
Identities = 143/149 (95%), Gaps = 1/149 (0%)
Strand = Plus / Minus
Query: 1173 tgaggatgatggtgttggtttgaaggtggagaggggtttgggtttgaaagaaagaggtgt 1232
||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 419 tgaggatgatgntgttgntttgaaggtggagagggttttgggtttgaaagaaagaggtgt 360
Query: 1233 tagtgagagtttagggagtgtaattttggttgttaggcct-cccagagaagaggatgatg 1291
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 359 tagtgagagtttagggagtgtaattttggttgttagncctccccagagaagaggatgatg 300
Query: 1292 gtcaattgagtgatgaagattgggattga 1320
||||||||||||||||||||||||||||
Sbjct: 299 ctcaattgagtgatgaagattgggattga 271
>gnl|LJGI|BP041121
Length = 377
Score = 63.9 bits (32), Expect = 2e-09
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 1289 atggtcaattgagtgatgaagattgggattga 1320
||||||||||||||||||||||||||||||||
Sbjct: 377 atggtcaattgagtgatgaagattgggattga 346