Miyakogusa Predicted Gene
- Lj5g3v1314600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1314600.1 Non Chatacterized Hit- tr|C6TFN8|C6TFN8_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,88.66,0,S1,Ribosomal protein S1, RNA-binding domain; EXOSC1,Exosome
complex component CSL4; ECR1_N,Exosome c,CUFF.55140.1
(591 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72205 similar to UniRef100_A7PZ33 Cluster: Chromosome... 1029 0.0
gnl|LJGI|BW603694 similar to UniRef100_A7PZ33 Cluster: Chromosom... 779 0.0
>gnl|LJGI|TC72205 similar to UniRef100_A7PZ33 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 581
Score = 1029 bits (519), Expect = 0.0
Identities = 519/519 (100%)
Strand = Plus / Plus
Query: 1 atgggagaagacaaagcagagatggtgactccgggagaagtgctaggcagaagctccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgggagaagacaaagcagagatggtgactccgggagaagtgctaggcagaagctccgac 122
Query: 61 gtcaaacccggaagaggagcatacaccgccgctcacaacaaaaccgtctacgcctcctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gtcaaacccggaagaggagcatacaccgccgctcacaacaaaaccgtctacgcctcctta 182
Query: 121 accggcttccgccgcaccacgcctcccgaaccggactctcctgaccagagacccactgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 accggcttccgccgcaccacgcctcccgaaccggactctcctgaccagagacccactgtt 242
Query: 181 gaagttactggtcacaaggctcatggtcctgttcctcaacctggatctgttgtcattgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gaagttactggtcacaaggctcatggtcctgttcctcaacctggatctgttgtcattgca 302
Query: 241 cgggtcaccaaagtgatggctaggtcagcttcagctgatatcatgtgtgttggaccaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cgggtcaccaaagtgatggctaggtcagcttcagctgatatcatgtgtgttggaccaaag 362
Query: 301 tctgttcgagaaaagtttactggcatcatcaggcagcaagatgttagagcaactgagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tctgttcgagaaaagtttactggcatcatcaggcagcaagatgttagagcaactgagatt 422
Query: 361 gataaagtagagatgcacttatcttttcgtcctggtgacatcgttaaagctcttgtgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gataaagtagagatgcacttatcttttcgtcctggtgacatcgttaaagctcttgtgctt 482
Query: 421 tcgcttggagatgcacgggcgtactttctgtctactgcaaagaatgaacttggtgttgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcgcttggagatgcacgggcgtactttctgtctactgcaaagaatgaacttggtgttgtt 542
Query: 481 tctgcagaaagcactgctggtgcaactatggttcctata 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tctgcagaaagcactgctggtgcaactatggttcctata 581
>gnl|LJGI|BW603694 similar to UniRef100_A7PZ33 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 488
Score = 779 bits (393), Expect = 0.0
Identities = 393/393 (100%)
Strand = Plus / Plus
Query: 1 atgggagaagacaaagcagagatggtgactccgggagaagtgctaggcagaagctccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atgggagaagacaaagcagagatggtgactccgggagaagtgctaggcagaagctccgac 155
Query: 61 gtcaaacccggaagaggagcatacaccgccgctcacaacaaaaccgtctacgcctcctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gtcaaacccggaagaggagcatacaccgccgctcacaacaaaaccgtctacgcctcctta 215
Query: 121 accggcttccgccgcaccacgcctcccgaaccggactctcctgaccagagacccactgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 accggcttccgccgcaccacgcctcccgaaccggactctcctgaccagagacccactgtt 275
Query: 181 gaagttactggtcacaaggctcatggtcctgttcctcaacctggatctgttgtcattgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gaagttactggtcacaaggctcatggtcctgttcctcaacctggatctgttgtcattgca 335
Query: 241 cgggtcaccaaagtgatggctaggtcagcttcagctgatatcatgtgtgttggaccaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cgggtcaccaaagtgatggctaggtcagcttcagctgatatcatgtgtgttggaccaaag 395
Query: 301 tctgttcgagaaaagtttactggcatcatcaggcagcaagatgttagagcaactgagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tctgttcgagaaaagtttactggcatcatcaggcagcaagatgttagagcaactgagatt 455
Query: 361 gataaagtagagatgcacttatcttttcgtcct 393
|||||||||||||||||||||||||||||||||
Sbjct: 456 gataaagtagagatgcacttatcttttcgtcct 488