Miyakogusa Predicted Gene
- Lj5g3v1302290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1302290.1 Non Chatacterized Hit- tr|B8AEV9|B8AEV9_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,38.52,0.000000003,seg,NULL; FBOX,F-box domain, cyclin-like; A
Receptor for Ubiquitination Targets,F-box domain, cyclin,CUFF.55130.1
(669 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59528 weakly similar to UniRef100_A7QZ06 Cluster: Chr... 1318 0.0
gnl|LJGI|TC73348 weakly similar to UniRef100_A7PRZ4 Cluster: Chr... 1136 0.0
gnl|LJGI|FS317395 weakly similar to UniRef100_A7QZ12 Cluster: Ch... 767 0.0
>gnl|LJGI|TC59528 weakly similar to UniRef100_A7QZ06 Cluster: Chromosome undetermined
scaffold_261, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_261,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (50%)
Length = 1404
Score = 1318 bits (665), Expect = 0.0
Identities = 668/669 (99%)
Strand = Plus / Plus
Query: 1 atggtggtgtttgagaaccttcctgaaggttgcatcgctaacattctctccctcacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 atggtggtgtttgagaaccttcctgaaggttgcatcgctaacattctctccctcacttct 73
Query: 61 cctctcgatgtcggcagattggctctggtttcctccgctttcagatccgccgctgattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cctctcgatgtcggcagattggctctggtttcctccgctttcagatccgccgctgattcc 133
Query: 121 gacgccgtttgggatcggtttttgcccgatgatttcaactccatcatttctcattcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gacgccgtttgggatcggtttttgcccgatgatttcaactccatcatttctcattcttcc 193
Query: 181 tccaccgccgccgccgattccagctcctctttcaaatcgaagaaggacctctacctctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tccaccgccgccgccgattccagctcctctttcaaatcgaagaaggacctctacctctcg 253
Query: 241 ctctcgcacaatcccctcatcatcggcgacgggaagaagagttttcagctggtgaatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctctcgcacaatcccctcatcatcggcgacgggaagaagagttttcagctggtgaatggg 313
Query: 301 aagaaatgctacatgctatcagctagggctctgtccattgtatggggagatactcctagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aagaaatgctacatgctatcagctagggctctgtccattgtatggggagatactcctagg 373
Query: 361 tattggaggtggatttctcttccagaggctaggttctctgaggtggctgaacttgtgagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tattggaggtggatttctcttccagaggctaggttctctgaggtggctgaacttgtgagc 433
Query: 421 gtgtgttggttggaaatccggggctggatcaacaataagatgctgtcaccagagactatg 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 434 gtgtgttggttggaaatccggggctggatcaacactaagatgctgtcaccagagactatg 493
Query: 481 tacggggcgtaccttgtgtttaagccgagtggtggagcctatgggtttgagttccagtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tacggggcgtaccttgtgtttaagccgagtggtggagcctatgggtttgagttccagtca 553
Query: 541 gttgaagtgtctgttggatttgctggaggtaatgcgcagaggcgcgatgtgtacttcgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gttgaagtgtctgttggatttgctggaggtaatgcgcagaggcgcgatgtgtacttcgat 613
Query: 601 gctgaaagggaacgaaggctgagataccagattgttgctggccgtgcccctgccgggatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gctgaaagggaacgaaggctgagataccagattgttgctggccgtgcccctgccgggatt 673
Query: 661 ttcaacaga 669
|||||||||
Sbjct: 674 ttcaacaga 682
>gnl|LJGI|TC73348 weakly similar to UniRef100_A7PRZ4 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (42%)
Length = 743
Score = 1136 bits (573), Expect = 0.0
Identities = 576/577 (99%)
Strand = Plus / Plus
Query: 1 atggtggtgtttgagaaccttcctgaaggttgcatcgctaacattctctccctcacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atggtggtgtttgagaaccttcctgaaggttgcatcgctaacattctctccctcacttct 226
Query: 61 cctctcgatgtcggcagattggctctggtttcctccgctttcagatccgccgctgattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 cctctcgatgtcggcagattggctctggtttcctccgctttcagatccgccgctgattcc 286
Query: 121 gacgccgtttgggatcggtttttgcccgatgatttcaactccatcatttctcattcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gacgccgtttgggatcggtttttgcccgatgatttcaactccatcatttctcattcttcc 346
Query: 181 tccaccgccgccgccgattccagctcctctttcaaatcgaagaaggacctctacctctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tccaccgccgccgccgattccagctcctctttcaaatcgaagaaggacctctacctctcg 406
Query: 241 ctctcgcacaatcccctcatcatcggcgacgggaagaagagttttcagctggtgaatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ctctcgcacaatcccctcatcatcggcgacgggaagaagagttttcagctggtgaatggg 466
Query: 301 aagaaatgctacatgctatcagctagggctctgtccattgtatggggagatactcctagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 aagaaatgctacatgctatcagctagggctctgtccattgtatggggagatactcctagg 526
Query: 361 tattggaggtggatttctcttccagaggctaggttctctgaggtggctgaacttgtgagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tattggaggtggatttctcttccagaggctaggttctctgaggtggctgaacttgtgagc 586
Query: 421 gtgtgttggttggaaatccggggctggatcaacaataagatgctgtcaccagagactatg 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 587 gtgtgttggttggaaatccggggctggatcaacactaagatgctgtcaccagagactatg 646
Query: 481 tacggggcgtaccttgtgtttaagccgagtggtggagcctatgggtttgagttccagtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tacggggcgtaccttgtgtttaagccgagtggtggagcctatgggtttgagttccagtca 706
Query: 541 gttgaagtgtctgttggatttgctggaggtaatgcgc 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 707 gttgaagtgtctgttggatttgctggaggtaatgcgc 743
>gnl|LJGI|FS317395 weakly similar to UniRef100_A7QZ12 Cluster: Chromosome undetermined
scaffold_261, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_261,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (36%)
Length = 706
Score = 767 bits (387), Expect = 0.0
Identities = 387/387 (100%)
Strand = Plus / Plus
Query: 1 atggtggtgtttgagaaccttcctgaaggttgcatcgctaacattctctccctcacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atggtggtgtttgagaaccttcctgaaggttgcatcgctaacattctctccctcacttct 81
Query: 61 cctctcgatgtcggcagattggctctggtttcctccgctttcagatccgccgctgattcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 cctctcgatgtcggcagattggctctggtttcctccgctttcagatccgccgctgattcc 141
Query: 121 gacgccgtttgggatcggtttttgcccgatgatttcaactccatcatttctcattcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gacgccgtttgggatcggtttttgcccgatgatttcaactccatcatttctcattcttcc 201
Query: 181 tccaccgccgccgccgattccagctcctctttcaaatcgaagaaggacctctacctctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tccaccgccgccgccgattccagctcctctttcaaatcgaagaaggacctctacctctcg 261
Query: 241 ctctcgcacaatcccctcatcatcggcgacgggaagaagagttttcagctggtgaatggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctctcgcacaatcccctcatcatcggcgacgggaagaagagttttcagctggtgaatggg 321
Query: 301 aagaaatgctacatgctatcagctagggctctgtccattgtatggggagatactcctagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagaaatgctacatgctatcagctagggctctgtccattgtatggggagatactcctagg 381
Query: 361 tattggaggtggatttctcttccagag 387
|||||||||||||||||||||||||||
Sbjct: 382 tattggaggtggatttctcttccagag 408
Score = 391 bits (197), Expect = e-108
Identities = 200/201 (99%)
Strand = Plus / Plus
Query: 469 ccagagactatgtacggggcgtaccttgtgtttaagccgagtggtggagcctatgggttt 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ccagagactatgtacggggcgtaccttgtgtttaagccgagtggtggagcctatgggttt 462
Query: 529 gagttccagtcagttgaagtgtctgttggatttgctggaggtaatgcgcagaggcgcgat 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gagttccagtcagttgaagtgtctgttggatttgctggaggtaatgcgcagaggcgcgat 522
Query: 589 gtgtacttcgatgctgaaagggaacgaaggctgagataccagattgttgctggccgtgcc 648
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gtgtacttcgatgccgaaagggaacgaaggctgagataccagattgttgctggccgtgcc 582
Query: 649 cctgccgggattttcaacaga 669
|||||||||||||||||||||
Sbjct: 583 cctgccgggattttcaacaga 603