Miyakogusa Predicted Gene
- Lj5g3v1275080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1275080.1 gi|1370159|emb|Z73958.1|.path2.1
(672 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64554 UniRef100_Q40200 Cluster: RAB11J; n=1; Lotus ja... 1324 0.0
gnl|LJGI|BW607014 homologue to UniRef100_Q08145 Cluster: GTP-bin... 74 1e-12
gnl|LJGI|TC72399 homologue to UniRef100_Q08145 Cluster: GTP-bind... 74 1e-12
gnl|LJGI|TC57539 UniRef100_Q40191 Cluster: Ras-related protein R... 62 5e-09
>gnl|LJGI|TC64554 UniRef100_Q40200 Cluster: RAB11J; n=1; Lotus japonicus|Rep: RAB11J -
Lotus japonicus, complete
Length = 1197
Score = 1324 bits (668), Expect = 0.0
Identities = 671/672 (99%)
Strand = Plus / Plus
Query: 1 atggctcattataatgaagatgagaagactgaggattaccttttcaagattgttttgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atggctcattataatgaagatgagaagactgaggattaccttttcaagattgttttgatc 497
Query: 61 ggtgattcagctgttgggaaatcaaatttacttgcgagatttgccagggatgagttttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggtgattcagctgttgggaaatcaaatttacttgcgagatttgccagggatgagttttat 557
Query: 121 cctaattcaaagtcaactataggagtagagttccaaactcagaagatcgatataaatgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cctaattcaaagtcaactataggagtagagttccaaactcagaagatcgatataaatgga 617
Query: 181 aaggaaattaaagcgcagatatgggacacagctgggcaagagaggttcagagctgttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaggaaattaaagcgcagatatgggacacagctgggcaagagaggttcagagctgttaca 677
Query: 241 tctgcatattataggggcgctgttggagcacttgtagtatatgatattagcaggcgccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tctgcatattataggggcgctgttggagcacttgtagtatatgatattagcaggcgccaa 737
Query: 301 acgtttgatagcattggtcgatggctgaacgaacttcacactcactctgacatgaacgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 acgtttgatagcattggtcgatggctgaacgaacttcacactcactctgacatgaacgtt 797
Query: 361 gtcaccatacttgttgggaacaagtcagatcttaaggatgcaagggaggtgactactgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 gtcaccatacttgttgggaacaagtcagatcttaaggatgcaagggaggtgactactgct 857
Query: 421 gaaggcaaggccttagctgaagcacagggtttgttcttcatggagacatcagctcttgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaaggcaaggccttagctgaagcacagggtttgttcttcatggagacatcagctcttgat 917
Query: 481 tcatcaaatgtagcagcagcttttcaaacagttgtaaaggagatctacaacattctaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 tcatcaaatgtagcagcagcttttcaaacagttgtaaaggagatctacaacattctaagt 977
Query: 541 cggaaggttatgatgtctcaagagctcagcaaacatgaagttccgcggattgaaaatggg 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 978 cggaaggttatgatgtctcaagagctcaccaaacatgaagttccgcggattgaaaatggg 1037
Query: 601 aagagtgtggttatacaaggagaaaatctagaagcagatgggcagtcaaaaaagggttgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 aagagtgtggttatacaaggagaaaatctagaagcagatgggcagtcaaaaaagggttgt 1097
Query: 661 tgttcctcttag 672
||||||||||||
Sbjct: 1098 tgttcctcttag 1109
>gnl|LJGI|BW607014 homologue to UniRef100_Q08145 Cluster: GTP-binding protein; n=1;
Pisum sativum|Rep: GTP-binding protein - Pisum sativum
(Garden pea), partial (59%)
Length = 520
Score = 73.8 bits (37), Expect = 1e-12
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 193 gcgcagatatgggacacagctgggcaagagaggttcagagctgttacatctgcatattat 252
|||||||| |||||||| || ||||||||| ||||||| || ||||| || || || ||
Sbjct: 324 gcgcagatctgggacaccgccgggcaagagcggttcagggcggttacttccgcttactac 383
Query: 253 aggggcgctgttggagcacttgtagtatatgatatta 289
|| |||||||||||||| ||||| || ||||||||||
Sbjct: 384 agaggcgctgttggagctcttgttgtttatgatatta 420
>gnl|LJGI|TC72399 homologue to UniRef100_Q08145 Cluster: GTP-binding protein; n=1;
Pisum sativum|Rep: GTP-binding protein - Pisum sativum
(Garden pea), complete
Length = 1244
Score = 73.8 bits (37), Expect = 1e-12
Identities = 82/97 (84%)
Strand = Plus / Plus
Query: 193 gcgcagatatgggacacagctgggcaagagaggttcagagctgttacatctgcatattat 252
|||||||| |||||||| || ||||||||| ||||||| || ||||| || || || ||
Sbjct: 297 gcgcagatctgggacaccgccgggcaagagcggttcagggcggttacttccgcttactac 356
Query: 253 aggggcgctgttggagcacttgtagtatatgatatta 289
|| |||||||||||||| ||||| || ||||||||||
Sbjct: 357 agaggcgctgttggagctcttgttgtttatgatatta 393
>gnl|LJGI|TC57539 UniRef100_Q40191 Cluster: Ras-related protein Rab11A; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11A - Lotus
japonicus, complete
Length = 985
Score = 61.9 bits (31), Expect = 5e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 196 cagatatgggacacagctgggcaagagaggttcagagctgttacatctgcatattatagg 255
||||| |||||||| ||||| ||||| || | |||||| |||||| ||||||||| |||
Sbjct: 267 cagatctgggacactgctggtcaagaaagatacagagcagttacaagtgcatattacagg 326
Query: 256 ggcgctgttggagca 270
|| ||||||||||||
Sbjct: 327 ggtgctgttggagca 341