Miyakogusa Predicted Gene
- Lj5g3v1264020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1264020.1 Non Chatacterized Hit- tr|I1M2V0|I1M2V0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25150
PE,78.27,0,NUP_C,Peptidase S59, nucleoporin; Nucleoporin2,Peptidase
S59, nucleoporin; NUCLEOPORIN,NULL; no desc,CUFF.55113.1
(3063 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW595532 similar to UniRef100_A7QJ03 Cluster: Chromosom... 932 0.0
gnl|LJGI|TC82683 similar to UniRef100_A7QJ03 Cluster: Chromosome... 852 0.0
gnl|LJGI|AV768431 similar to UniRef100_A7QJ03 Cluster: Chromosom... 474 e-132
gnl|LJGI|TC78804 similar to UniRef100_A7QJ03 Cluster: Chromosome... 281 1e-74
gnl|LJGI|BW630042 similar to UniRef100_Q9SY83 Cluster: F14N23.29... 268 2e-70
>gnl|LJGI|BW595532 similar to UniRef100_A7QJ03 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 482
Score = 932 bits (470), Expect = 0.0
Identities = 473/474 (99%)
Strand = Plus / Plus
Query: 1216 agttcatctacaacacaaacaaacgccttttctccttcaccatcatttggtcaatcatca 1275
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 agttcgtctacaacacaaacaaacgccttttctccttcaccatcatttggtcaatcatca 68
Query: 1276 gccaatcctttctctagcacaacacctaattctaatccatttgcacagaagacttcaact 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gccaatcctttctctagcacaacacctaattctaatccatttgcacagaagacttcaact 128
Query: 1336 tttactacttctgcatttggtggaacttcatctgctccttccttcagttcatcagctttt 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tttactacttctgcatttggtggaacttcatctgctccttccttcagttcatcagctttt 188
Query: 1396 ggttcttccacatcagcagcagcaccttcaatttttggcgcagctacaccttcatttgga 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ggttcttccacatcagcagcagcaccttcaatttttggcgcagctacaccttcatttgga 248
Query: 1456 gctaactcttcaccatcaccgacctttggtcaatctccatccctgtttaatactgctcct 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gctaactcttcaccatcaccgacctttggtcaatctccatccctgtttaatactgctcct 308
Query: 1516 gctcagcctacatcttcaccatttggctcaagcatttttggcaatacccagccatcccaa 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gctcagcctacatcttcaccatttggctcaagcatttttggcaatacccagccatcccaa 368
Query: 1576 ttatttagctctgcagcccctacgcagccaactaatgcttttggacagaataccgcctcc 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttatttagctctgcagcccctacgcagccaactaatgcttttggacagaataccgcctcc 428
Query: 1636 ccctttgggcagactgcatcttttggtcaatcaagcttgtttaattctccatcg 1689
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ccctttgggcagactgcatcttttggtcaatcaagcttgtttaattctccatcg 482
>gnl|LJGI|TC82683 similar to UniRef100_A7QJ03 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 615
Score = 852 bits (430), Expect = 0.0
Identities = 469/482 (97%)
Strand = Plus / Plus
Query: 1 atgttcggttcaacaaacccttttgggcagcagtcgtcgagcccgtttggctcctcccag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgttcggttcaacaaaccctttggggcagcagtcgtcgagcccgtttggctcctcccag 193
Query: 61 tcggttttcgggcagaacaattcaagtagcaatccttttgccccgaagccgtttggtagt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 194 tcggttttcgggcagaacaattcaagtagcaatcctttggccccgaagccgtttggtagt 253
Query: 121 aatactactccatttggtgcacaaacaggtacttccatgtttggaggtacttccactggt 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 254 aatactactccatttggtgcacaaacaggtacttccatgtgtggaggtacttccactggt 313
Query: 181 gtatttggtgcagctcaacaatcttctcccttctcttccactacggctttcggggcttca 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gtattaggtgcagctcaacaatcttctcccttctcttccactacggctttcggggcttca 373
Query: 241 tcttcaccagctttcggtagttcagcgcctgcttttgggtcaacttcaactccgacattc 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 374 tcttcaccagctttcggtagttcagcgcctgctttagggtcaacttcaactccgacattc 433
Query: 301 ggtaattcatcatcatcatcgtttggaggatcatccgtattcggtcagaagcctgctttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggtaattcatcatcatcatcgtttggaggatcatccgtattcggtcagaagcctgcttgg 493
Query: 361 ggaggttttggctctactcctactcaaacaagtccatttggaggtgccgctcaaccatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggaggttttggctctactcctactcaaacaagtccatttggaggtgccgctcaaccatca 553
Query: 421 caaccagcatttggaagcagcatatttggttcgtcaacaccttttggcgcatcatctcag 480
||||||| ||| |||||||||||||| |||||| | ||| ||||||||||||||||||||
Sbjct: 554 caaccaggattcggaagcagcatattcggttcgcccacagcttttggcgcatcatctcag 613
Query: 481 cc 482
||
Sbjct: 614 cc 615
>gnl|LJGI|AV768431 similar to UniRef100_A7QJ03 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 381
Score = 474 bits (239), Expect = e-132
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 91 aatccttttgccccgaagccgtttggtagtaatactactccatttggtgcacaaacaggt 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatccttttgccccgaagccgtttggtagtaatactactccatttggtgcacaaacaggt 322
Query: 151 acttccatgtttggaggtacttccactggtgtatttggtgcagctcaacaatcttctccc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttccatgtttggaggtacttccactggtgtatttggtgcagctcaacaatcttctccc 262
Query: 211 ttctcttccactacggctttcggggcttcatcttcaccagctttcggtagttcagcgcct 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctcttccactacggctttcggggcttcatcttcaccagctttcggtagttcagcgcct 202
Query: 271 gcttttgggtcaacttcaactccgacattcggtaattcatcatcatcatcgtttggagg 329
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcttttgggtcaacttcaactccgacattcggtaattcatcatcatcatcgtttggagg 143
>gnl|LJGI|TC78804 similar to UniRef100_A7QJ03 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 394
Score = 281 bits (142), Expect = 1e-74
Identities = 145/146 (99%)
Strand = Plus / Plus
Query: 2918 aggagatgctgaagagaaaggctgatgaccaaggtgctcaatttgtgtcatatgatgcct 2977
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 aggagatgctgaagagaaaggctgatgacccaggtgctcaatttgtgtcatatgatgcct 60
Query: 2978 ccaaaggagagtggaagatcagagtcacccacttcagtgtttacaagctggtagaagaag 3037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaaaggagagtggaagatcagagtcacccacttcagtgtttacaagctggtagaagaag 120
Query: 3038 acagttggatggaagatgacgcatga 3063
||||||||||||||||||||||||||
Sbjct: 121 acagttggatggaagatgacgcatga 146
>gnl|LJGI|BW630042 similar to UniRef100_Q9SY83 Cluster: F14N23.29; n=1; Arabidopsis
thaliana|Rep: F14N23.29 - Arabidopsis thaliana
(Mouse-ear cress), partial (5%)
Length = 452
Score = 268 bits (135), Expect = 2e-70
Identities = 215/239 (89%), Gaps = 2/239 (0%)
Strand = Plus / Plus
Query: 752 ctagtactcctgcttttggtgcttctagtacccctgcttttggtgcttctagtacccctg 811
||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||
Sbjct: 193 ctagtactcctgcttgtggtgcttctagtacccctgcctgtggtgcttgtagtacccctg 252
Query: 812 cttttggggcttctagtacccctgcttttagttttagctccaaccaagcttttggtcaat 871
|| ||| ||||||||||||||| ||||||||||| || ||| ||||||||||||| |
Sbjct: 253 ctaatggtgcttctagtaccccttcttttagttttggccccacaaaagcttttggtcagt 312
Query: 872 ctagttctgcctttggcagtagccgtccctttggtagtacaacctcaccctttggaggcc 931
|||||||| | ||||| |||||| | || ||||| ||||||||||||||||||||||| |
Sbjct: 313 ctagttctacatttggtagtagcagcccatttgggagtacaacctcaccctttggaggtc 372
Query: 932 agagttctgcatttggatc-ccagactccaactccggcttttggaagtactggttttgg 989
||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 373 agagttctgcatttggatctccag-ctccaactccggcttttggaagtactggttttgg 430
Score = 99.6 bits (50), Expect = 1e-19
Identities = 86/98 (87%)
Strand = Plus / Plus
Query: 617 cctcaagcccaacctttggtaacacagggagtgcatttggcgtgtcaagtgctcctgcgt 676
||||||||||||| |||||||||| |||| ||||||||| ||| |||||||||||| ||
Sbjct: 1 cctcaagcccaacttttggtaacaatgggaatgcatttggtgtgccaagtgctcctgtgt 60
Query: 677 ttggaggtgggggagcatttggtgcttcaagtagccct 714
| |||||||||||||||||| | || ||||||| ||||
Sbjct: 61 tcggaggtgggggagcatttagggcgtcaagtaaccct 98
Score = 77.8 bits (39), Expect = 4e-13
Identities = 75/87 (86%)
Strand = Plus / Plus
Query: 730 agtacgcctgcatttggggcctctagtactcctgcttttggtgcttctagtacccctgct 789
||||| ||||| | ||| || |||||||| ||||| | |||||||| |||||||||||||
Sbjct: 195 agtactcctgcttgtggtgcttctagtacccctgcctgtggtgcttgtagtacccctgct 254
Query: 790 tttggtgcttctagtacccctgctttt 816
||||||||||||||||||| |||||
Sbjct: 255 aatggtgcttctagtaccccttctttt 281