Miyakogusa Predicted Gene
- Lj5g3v1264010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1264010.1 Non Chatacterized Hit- tr|I1NII1|I1NII1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.5,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; PHOSPHATIDYLCHOLINE TRANSFER PROTEIN,NULL;
no description,START-,CUFF.55122.1
(1401 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63566 similar to UniRef100_A7QJ33 Cluster: Chromosome... 2577 0.0
gnl|LJGI|TC72455 similar to UniRef100_Q9XF49 Cluster: Membrane r... 1231 0.0
gnl|LJGI|TC73319 similar to UniRef100_A7QJ33 Cluster: Chromosome... 62 1e-08
gnl|LJGI|BW625977 similar to UniRef100_A7NX17 Cluster: Chromosom... 60 4e-08
gnl|LJGI|TC62151 similar to UniRef100_A7NX17 Cluster: Chromosome... 60 4e-08
>gnl|LJGI|TC63566 similar to UniRef100_A7QJ33 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 1687
Score = 2577 bits (1300), Expect = 0.0
Identities = 1300/1300 (100%)
Strand = Plus / Plus
Query: 102 ccggagaattggttgttccgcttcttcttccgccgcatccaccaccgcaacccacggcgg 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ccggagaattggttgttccgcttcttcttccgccgcatccaccaccgcaacccacggcgg 62
Query: 162 agggttttattttatcatctcaccaccaccaccctccatgtccttattaggaatcttcca 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agggttttattttatcatctcaccaccaccaccctccatgtccttattaggaatcttcca 122
Query: 222 gaaacccgcggttttgaacttccttgtagacctcgccatgttcatcgctccgctctggat 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gaaacccgcggttttgaacttccttgtagacctcgccatgttcatcgctccgctctggat 182
Query: 282 tgcggttctcgtcggcgtcgtgctcggctgggcttggaaacctaaatgggccgccgccgt 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tgcggttctcgtcggcgtcgtgctcggctgggcttggaaacctaaatgggccgccgccgt 242
Query: 342 cgacagtgaacatgcttggaccaatttcttccacttccgcagcttcccctggttccccaa 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cgacagtgaacatgcttggaccaatttcttccacttccgcagcttcccctggttccccaa 302
Query: 402 ttcggacctccacaacggacccgaacccgacccggatttttcatactccaccagttcggg 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ttcggacctccacaacggacccgaacccgacccggatttttcatactccaccagttcggg 362
Query: 462 cgcgccttctctgaaaggcgtgagctcgctggtaactgagcaagatttgcggcagttatc 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cgcgccttctctgaaaggcgtgagctcgctggtaactgagcaagatttgcggcagttatc 422
Query: 522 gaagttagttgaggagaaagatggtggactggcatggattcagatgatggatcgttctac 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaagttagttgaggagaaagatggtggactggcatggattcagatgatggatcgttctac 482
Query: 582 tcagaccatgagctaccaagcatggcgtagggacccggagagtggaccgccgcagtatcg 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tcagaccatgagctaccaagcatggcgtagggacccggagagtggaccgccgcagtatcg 542
Query: 642 aagtaggactgtttttgaggatgcgagtgctgagttggtgagggatttcttttgggatga 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagtaggactgtttttgaggatgcgagtgctgagttggtgagggatttcttttgggatga 602
Query: 702 tgagtataggttgaagtgggatgacatgcttatacatgcttcgattattgaagattgcgc 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgagtataggttgaagtgggatgacatgcttatacatgcttcgattattgaagattgcgc 662
Query: 762 tgttaccggagcaatgatggtgcattgggtgcgcaagtttcccttcttttgcagtgatcg 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tgttaccggagcaatgatggtgcattgggtgcgcaagtttcccttcttttgcagtgatcg 722
Query: 822 agagtatatcattggtcgtcgaatttggaatgcaggaaatgcttactactgtgtcacaaa 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 agagtatatcattggtcgtcgaatttggaatgcaggaaatgcttactactgtgtcacaaa 782
Query: 882 gggagtaccttgctcctctatgccaaggcagaacaaacctaaacgagtcgatctatatta 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gggagtaccttgctcctctatgccaaggcagaacaaacctaaacgagtcgatctatatta 842
Query: 942 ttcgagcttttgtattcgtccagttaaatcaagaaaagatggccagctgactgcatgcga 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ttcgagcttttgtattcgtccagttaaatcaagaaaagatggccagctgactgcatgcga 902
Query: 1002 ggtgttattgtttcactatgaggatatgggcataccctgggaaatcgctaagcttggagt 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ggtgttattgtttcactatgaggatatgggcataccctgggaaatcgctaagcttggagt 962
Query: 1062 tcgccagggcatgtggggagctgtgaagaagtttgatccagcactacggatatatgagaa 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 tcgccagggcatgtggggagctgtgaagaagtttgatccagcactacggatatatgagaa 1022
Query: 1122 agaaagggcttctggtgcattatcacgctgtgctaacgctgctaaaatcaacactaaagt 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 agaaagggcttctggtgcattatcacgctgtgctaacgctgctaaaatcaacactaaagt 1082
Query: 1182 aactccagactatctgagatgtctggaagaaacaactggtaacttgttggagaatgaaaa 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 aactccagactatctgagatgtctggaagaaacaactggtaacttgttggagaatgaaaa 1142
Query: 1242 tcaggactcttctgtcaaaccaattgggaggaacatacctaagcttctagttgttggtgg 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 tcaggactcttctgtcaaaccaattgggaggaacatacctaagcttctagttgttggtgg 1202
Query: 1302 agccatcgcgcttgcctgcactcttgatcaaggactagtaactaaggcagttatatttgg 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 agccatcgcgcttgcctgcactcttgatcaaggactagtaactaaggcagttatatttgg 1262
Query: 1362 agtagctcgaaggtttgcgaaaattggaaggaggttgtga 1401
||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 agtagctcgaaggtttgcgaaaattggaaggaggttgtga 1302
>gnl|LJGI|TC72455 similar to UniRef100_Q9XF49 Cluster: Membrane related protein CP5;
n=1; Arabidopsis thaliana|Rep: Membrane related protein
CP5 - Arabidopsis thaliana (Mouse-ear cress), partial
(21%)
Length = 634
Score = 1231 bits (621), Expect = 0.0
Identities = 621/621 (100%)
Strand = Plus / Plus
Query: 31 attgctcagctgttcacaatccctcactcgtccccacctctatttatcgccctttccccc 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 attgctcagctgttcacaatccctcactcgtccccacctctatttatcgccctttccccc 73
Query: 91 aatttcccaaaccggagaattggttgttccgcttcttcttccgccgcatccaccaccgca 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 aatttcccaaaccggagaattggttgttccgcttcttcttccgccgcatccaccaccgca 133
Query: 151 acccacggcggagggttttattttatcatctcaccaccaccaccctccatgtccttatta 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 acccacggcggagggttttattttatcatctcaccaccaccaccctccatgtccttatta 193
Query: 211 ggaatcttccagaaacccgcggttttgaacttccttgtagacctcgccatgttcatcgct 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggaatcttccagaaacccgcggttttgaacttccttgtagacctcgccatgttcatcgct 253
Query: 271 ccgctctggattgcggttctcgtcggcgtcgtgctcggctgggcttggaaacctaaatgg 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccgctctggattgcggttctcgtcggcgtcgtgctcggctgggcttggaaacctaaatgg 313
Query: 331 gccgccgccgtcgacagtgaacatgcttggaccaatttcttccacttccgcagcttcccc 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gccgccgccgtcgacagtgaacatgcttggaccaatttcttccacttccgcagcttcccc 373
Query: 391 tggttccccaattcggacctccacaacggacccgaacccgacccggatttttcatactcc 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tggttccccaattcggacctccacaacggacccgaacccgacccggatttttcatactcc 433
Query: 451 accagttcgggcgcgccttctctgaaaggcgtgagctcgctggtaactgagcaagatttg 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 accagttcgggcgcgccttctctgaaaggcgtgagctcgctggtaactgagcaagatttg 493
Query: 511 cggcagttatcgaagttagttgaggagaaagatggtggactggcatggattcagatgatg 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cggcagttatcgaagttagttgaggagaaagatggtggactggcatggattcagatgatg 553
Query: 571 gatcgttctactcagaccatgagctaccaagcatggcgtagggacccggagagtggaccg 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gatcgttctactcagaccatgagctaccaagcatggcgtagggacccggagagtggaccg 613
Query: 631 ccgcagtatcgaagtaggact 651
|||||||||||||||||||||
Sbjct: 614 ccgcagtatcgaagtaggact 634
>gnl|LJGI|TC73319 similar to UniRef100_A7QJ33 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 1537
Score = 61.9 bits (31), Expect = 1e-08
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 532 gaggagaaagatggtggactggcatggattcagatgatggatcgttctactcagaccatg 591
|||||||||||||| || || | ||||| |||||||||||||||||||| | ||| |||
Sbjct: 730 gaggagaaagatggaggtctcccttggatacagatgatggatcgttctacgccgactatg 789
Query: 592 agctaccaagcatggcgtaggga 614
||||| | |||||||| |||||
Sbjct: 790 ggctacaaggcatggcggaggga 812
>gnl|LJGI|BW625977 similar to UniRef100_A7NX17 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 488
Score = 60.0 bits (30), Expect = 4e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 643 agtaggactgtttttgaggatgcgagtgctgagttggtgagggatttcttttgggatgat 702
||||| ||||| ||||| ||||| | | | |||||||||||||||||||| |||||||||
Sbjct: 334 agtagaactgtctttgaagatgcaactccggagttggtgagggatttcttctgggatgat 393
Query: 703 ga 704
||
Sbjct: 394 ga 395
>gnl|LJGI|TC62151 similar to UniRef100_A7NX17 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 1672
Score = 60.0 bits (30), Expect = 4e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 643 agtaggactgtttttgaggatgcgagtgctgagttggtgagggatttcttttgggatgat 702
||||| ||||| ||||| ||||| | | | |||||||||||||||||||| |||||||||
Sbjct: 721 agtagaactgtctttgaagatgcaactccggagttggtgagggatttcttctgggatgat 780
Query: 703 ga 704
||
Sbjct: 781 ga 782
Score = 58.0 bits (29), Expect = 2e-07
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 811 tgcagtgatcgagagtatatcattggtcgtcgaatttggaatgcaggaaatgcttactac 870
|||||||||||||| |||||||||| ||| |||| ||| | || ||||| | |||||
Sbjct: 889 tgcagtgatcgagaatatatcattgctcgaagaatatggcaggctggaaacacatactat 948
Query: 871 tgtgtcacaaagggagt 887
|||||||||||||||||
Sbjct: 949 tgtgtcacaaagggagt 965