Miyakogusa Predicted Gene

Lj5g3v1261900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1261900.1 tr|I1LBX6|I1LBX6_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=1,92.36,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; UCH_2_3,Peptidase C19,
ubiquitin carboxyl-terminal ,CUFF.55098.1
         (438 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75863 similar to UniRef100_Q9ZSB5 Cluster: Ubiquitin ...   412   e-115

>gnl|LJGI|TC75863 similar to UniRef100_Q9ZSB5 Cluster: Ubiquitin carboxyl-terminal
           hydrolase 10; n=1; Arabidopsis thaliana|Rep: Ubiquitin
           carboxyl-terminal hydrolase 10 - Arabidopsis thaliana
           (Mouse-ear cress), partial (7%)
          Length = 987

 Score =  412 bits (208), Expect = e-115
 Identities = 208/208 (100%)
 Strand = Plus / Plus

                                                                       
Query: 231 ggatggacagtcctataagtataacctttatgcaatcagcaaccattatggtggtctagg 290
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggatggacagtcctataagtataacctttatgcaatcagcaaccattatggtggtctagg 60

                                                                       
Query: 291 tggcgggcattacaccgcatatgctaagttgatcgatgagaacaagtggtaccatttcga 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tggcgggcattacaccgcatatgctaagttgatcgatgagaacaagtggtaccatttcga 120

                                                                       
Query: 351 tgacagtcatgtcactcctgctgacgaagccgaaatcaaatcttcagctgcgtatgtgtt 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgacagtcatgtcactcctgctgacgaagccgaaatcaaatcttcagctgcgtatgtgtt 180

                                       
Query: 411 attttatcagagagttagaagttaagcc 438
           ||||||||||||||||||||||||||||
Sbjct: 181 attttatcagagagttagaagttaagcc 208