Miyakogusa Predicted Gene
- Lj5g3v1236750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1236750.1 Non Chatacterized Hit- tr|I0YWS9|I0YWS9_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,40.14,7e-18,coiled-coil,NULL; seg,NULL; cwf18,mRNA splicing factor,
Cwf18; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.55079.1
(486 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60256 similar to UniRef100_A7PAX9 Cluster: Chromosome... 944 0.0
gnl|LJGI|TC63801 similar to UniRef100_A7PAX9 Cluster: Chromosome... 942 0.0
>gnl|LJGI|TC60256 similar to UniRef100_A7PAX9 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 741
Score = 944 bits (476), Expect = 0.0
Identities = 482/484 (99%)
Strand = Plus / Plus
Query: 1 atgggtagcgaagaagaatcgattgagcaaaccgtcgcgtcccgtcgtgaaagattggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atgggtagcgaagaagaatcgattgagcaaaccgtcgcgtcccgtcgtgaaagattggca 101
Query: 61 gcattgagagcagctcaagaattatcgaatgctcctgaagctggaaccgaacctgaatct 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 gcattgagagcagctcgagaattatcgaatgctcctgaagctggaaccgaacctgaatct 161
Query: 121 gcagccgcaaatggcaacgatgatcgagatgaatcaccacaagaagaacaagaaaatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gcagccgcaaatggcaacgatgatcgagatgaatcaccacaagaagaacaagaaaatctg 221
Query: 181 agcatgaagttccgcaactatgttccacatgataagcatcttcaggaagggaagcttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 agcatgaagttccgcaactatgttccacatgataagcatcttcaggaagggaagcttgcc 281
Query: 241 cctgcagtgttaccgaagtttgaagaccctgttgctgcttctgcgcctgagcctcatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 cctgcagtgttaccgaagtttgaagaccctgttgctgcttctgcgcctgagcctcatccc 341
Query: 301 caggaggacccttttctgaatattgctcctaagaaacctaactgggacctgcgccgagat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 342 caggaggacccttttctgaatattgctcctaagaaacctaactgggacctgcgccgtgat 401
Query: 361 gtgcagaagaagcttgataagcttgagaagcgaactcagaaggcgctctatcagctcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtgcagaagaagcttgataagcttgagaagcgaactcagaaggcgctctatcagctcatg 461
Query: 421 gtggaacaagagaagcaaaaggagttggctgagggagatgatacaaatggcacattagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gtggaacaagagaagcaaaaggagttggctgagggagatgatacaaatggcacattagat 521
Query: 481 taga 484
||||
Sbjct: 522 taga 525
>gnl|LJGI|TC63801 similar to UniRef100_A7PAX9 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 941
Score = 942 bits (475), Expect = 0.0
Identities = 484/486 (99%), Gaps = 2/486 (0%)
Strand = Plus / Plus
Query: 1 atgggtagcgaagaagaatcgattgagcaaaccgtcgcgtcccgtcgtgaaagattggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atgggtagcgaagaagaatcgattgagcaaaccgtcgcgtcccgtcgtgaaagattggca 141
Query: 61 gcattgagagcagctcaagaattatcgaatgctcctgaagctggaaccgaacctgaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gcattgagagcagctcaagaattatcgaatgctcctgaagctggaaccgaacctgaatct 201
Query: 121 gcagccgcaaatggcaacgatgatcgagatgaatcaccacaagaagaacaagaaaatctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gcagccgcaaatggcaacgatgatcgagatgaatcaccacaagaagaacaagaaaatctg 261
Query: 181 agcatgaagttccgcaactatgttccacatgataagcatcttcaggaagggaagcttgcc 240
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 262 agcatgaagttccgcaactatgttcca--tgataagcatcttcaggaagggaagcttgcc 319
Query: 241 cctgcagtgttaccgaagtttgaagaccctgttgctgcttctgcgcctgagcctcatccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctgcagtgttaccgaagtttgaagaccctgttgctgcttctgcgcctgagcctcatccc 379
Query: 301 caggaggacccttttctgaatattgctcctaagaaacctaactgggacctgcgccgagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caggaggacccttttctgaatattgctcctaagaaacctaactgggacctgcgccgagat 439
Query: 361 gtgcagaagaagcttgataagcttgagaagcgaactcagaaggcgctctatcagctcatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgcagaagaagcttgataagcttgagaagcgaactcagaaggcgctctatcagctcatg 499
Query: 421 gtggaacaagagaagcaaaaggagttggctgagggagatgatacaaatggcacattagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtggaacaagagaagcaaaaggagttggctgagggagatgatacaaatggcacattagat 559
Query: 481 tagatt 486
||||||
Sbjct: 560 tagatt 565