Miyakogusa Predicted Gene

Lj5g3v1224670.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1224670.1 Non Chatacterized Hit- tr|A5C4C8|A5C4C8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,43.7,5e-19,seg,NULL,CUFF.55066.1
         (397 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62577 similar to UniRef100_A7QR15 Cluster: Chromosome...   787   0.0  
gnl|LJGI|TC65858 similar to UniRef100_A7QR15 Cluster: Chromosome...   147   6e-35
gnl|LJGI|TC74218 similar to UniRef100_A7QR15 Cluster: Chromosome...    84   7e-16

>gnl|LJGI|TC62577 similar to UniRef100_A7QR15 Cluster: Chromosome undetermined
           scaffold_147, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_147,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (15%)
          Length = 736

 Score =  787 bits (397), Expect = 0.0
 Identities = 397/397 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttatgtggatgtggatggttcttctggctctggagaggatttgaatatgttggat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atggcttatgtggatgtggatggttcttctggctctggagaggatttgaatatgttggat 289

                                                                       
Query: 61  gggcacaagcttcaccctgttctaccgtctggttccggtggtggtcgaaagcggagccgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gggcacaagcttcaccctgttctaccgtctggttccggtggtggtcgaaagcggagccgg 349

                                                                       
Query: 121 aaggctaatggggatgccatagttgatgccatgctggagatagcagctgcttcgaagatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aaggctaatggggatgccatagttgatgccatgctggagatagcagctgcttcgaagatg 409

                                                                       
Query: 181 agggcatctgcaattttgaagagtgaggacaggttttctataagcaagtgcattaaggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agggcatctgcaattttgaagagtgaggacaggttttctataagcaagtgcattaaggtg 469

                                                                       
Query: 241 ttggatgagttgcaaggcgttgatgaacgggcttactttcttgctttggatttgtttgag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttggatgagttgcaaggcgttgatgaacgggcttactttcttgctttggatttgtttgag 529

                                                                       
Query: 301 aatagctctagtgctcgcgagattttcatttctctcaagggagacaagagattgccttgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aatagctctagtgctcgcgagattttcatttctctcaagggagacaagagattgccttgg 589

                                                
Query: 361 ttgctgggcaagtgtgttggtgtcccctctagttgat 397
           |||||||||||||||||||||||||||||||||||||
Sbjct: 590 ttgctgggcaagtgtgttggtgtcccctctagttgat 626


>gnl|LJGI|TC65858 similar to UniRef100_A7QR15 Cluster: Chromosome undetermined
           scaffold_147, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_147,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (20%)
          Length = 608

 Score =  147 bits (74), Expect = 6e-35
 Identities = 197/238 (82%)
 Strand = Plus / Plus

                                                                       
Query: 139 atagttgatgccatgctggagatagcagctgcttcgaagatgagggcatctgcaattttg 198
           ||||| ||||| ||| ||||||| || ||||||||||||||||||||    || ||| ||
Sbjct: 212 atagtggatgctatgatggagattgcggctgcttcgaagatgagggctagcgcgattgtg 271

                                                                       
Query: 199 aagagtgaggacaggttttctataagcaagtgcattaaggtgttggatgagttgcaaggc 258
           |||| ||||||||| || || |||| ||||||||| || |||||||||||| ||||||| 
Sbjct: 272 aagaatgaggacagattctccataaacaagtgcatcaaagtgttggatgagatgcaaggt 331

                                                                       
Query: 259 gttgatgaacgggcttactttcttgctttggatttgtttgagaatagctctagtgctcgc 318
           |||||||||| |  |||||||||||||||||||||||||||| ||  | | | ||| || 
Sbjct: 332 gttgatgaacagatttactttcttgctttggatttgtttgaggatcaccccaatgcccgt 391

                                                                     
Query: 319 gagattttcatttctctcaagggagacaagagattgccttggttgctgggcaagtgtg 376
           ||| ||||||| ||| | ||||| || || |||||||| ||||||| |||||| ||||
Sbjct: 392 gaggttttcatctctattaagggtgaaaaaagattgccatggttgcagggcaaatgtg 449


>gnl|LJGI|TC74218 similar to UniRef100_A7QR15 Cluster: Chromosome undetermined
           scaffold_147, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_147,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (56%)
          Length = 887

 Score = 83.8 bits (42), Expect = 7e-16
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                       
Query: 139 atagttgatgccatgctggagatagcagctgcttcgaagatgagggcatctgcaattttg 198
           ||||| ||||| ||| ||||||| || ||||||||||||||||||||    || ||| ||
Sbjct: 190 atagtggatgctatgatggagattgcggctgcttcgaagatgagggctagcgcgattgtg 249

                                                                     
Query: 199 aagagtgaggacaggttttctataagcaagtgcattaaggtgttggatgagttgcaag 256
           |||| ||||||||| || || |||| ||||||||| || |||||||||||| ||||||
Sbjct: 250 aagaatgaggacagattctccataaacaagtgcatcaaagtgttggatgagatgcaag 307