Miyakogusa Predicted Gene
- Lj5g3v1208280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1208280.1 Non Chatacterized Hit- tr|B9T874|B9T874_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,37.04,0.00000000000007,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; DUF668,Protein of unknown function DUF668,CUFF.55039.1
(1428 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79410 similar to UniRef100_A7QGU2 Cluster: Chromosome... 1495 0.0
gnl|LJGI|TC70076 similar to UniRef100_A7QGU2 Cluster: Chromosome... 983 0.0
gnl|LJGI|TC76604 similar to UniRef100_A7QGU2 Cluster: Chromosome... 398 e-110
gnl|LJGI|TC72074 weakly similar to UniRef100_A7QGU2 Cluster: Chr... 135 8e-31
>gnl|LJGI|TC79410 similar to UniRef100_A7QGU2 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 819
Score = 1495 bits (754), Expect = 0.0
Identities = 784/790 (99%), Gaps = 3/790 (0%)
Strand = Plus / Plus
Query: 641 aggatttgaaagagagatccttatggggtagaagctttgatgg-tgttgttgttttgctt 699
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 1 aggatttgaaagagagatccttatggggtagaagctt-gatgggtgttgttgttttgctt 59
Query: 700 gtgaggttcagtttcactgttttggcaaggattaaggttgtgtttgggattggtcactct 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 gtgaggttcagtttcactgttttggcaaggattaaggttgtgtttgggattggtcactct 119
Query: 760 gtgccatgtttgtctaggagtttatcagcttctgctactgtttatcccactgatcagaac 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gtgccatgtttgtctaggagtttatcagcttctgctactgtttatcccactgatcagaac 179
Query: 820 cctgctagtggttgcaatttggcttctggggcattggaaaggttaaagattgaagggaag 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 cctgctagtggttgcaatttggcttctggggcattggaaaggttaaagattgaagggaag 239
Query: 880 gaaaaattggggagtgggtttt-ttgagtctaactctgagcttttgaagccaccacctag 938
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 240 gaaaaattggggagtgggtttttttgagtctaactctgagcttttgaagccaccacctag 299
Query: 939 tacattgggtgctgctgctttgggtttgcattattccaatttgatcattgtgatggagaa 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tacattgggtgctgctgctttgggtttgcattattccaatttgatcattgtgatggagaa 359
Query: 999 gatgattaagtcaccacatttggttggtttggatgctagggatgatttgtatgctatgtt 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gatgattaagtcaccacatttggttggtttggatgctagggatgatttgtatgctatgtt 419
Query: 1059 accaagtagtataaggtcagctttgagggctaggttgaaaggggtggggttttctgctag 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 accaagtagtataaggtcagctttgagggctaggttgaaaggggtggggttttctgctag 479
Query: 1119 tgatcctgtgcttgctggtgagtggagggatgcattggggaggatattggggtggttgtc 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgatcctgtgcttgctggtgagtggagggatgcattggggaggatattggggtggttgtc 539
Query: 1179 accattggcacataatatgatcaagtggcagagtgaaaggagctttgagcagcaaaactt 1238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tccattggcacataatatgatcaagtggcagagtgaaaggagctttgagcagcaaaactt 599
Query: 1239 ggtgcctaagaccaatgtgttgttgttgcaaactttgttctttgcaaacaaggagaagac 1298
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 600 ggtgcctaagaccaatgtgttgttgttgcaaactttgttctttgccaacaaggagaagac 659
Query: 1299 agaggctgctataactgagttgcttgtggggttgaactatatttggaggtttgagaggga 1358
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 660 agaggctgctataactgagttgcttgtggggttgacctatatttggaggtttgagaggga 719
Query: 1359 aatgactgctaaggcattgtttgaatgtgctaatttcaatggattgttaaagttgcaaaa 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aatgactgctaaggcattgtttgaatgtgctaatttcaatggattgttaaagttgcaaaa 779
Query: 1419 tcccagttag 1428
||||||||||
Sbjct: 780 tcccagttag 789
>gnl|LJGI|TC70076 similar to UniRef100_A7QGU2 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 734
Score = 983 bits (496), Expect = 0.0
Identities = 496/496 (100%)
Strand = Plus / Plus
Query: 1 atggccctcgaaaccctccttgtgaaggtgaaagccgccatctcaaacaccgtgcacccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atggccctcgaaaccctccttgtgaaggtgaaagccgccatctcaaacaccgtgcacccg 298
Query: 61 ccgaagctcctcctgaagaagaagccatcgttcaaatcccgacgaaacgtcggcgtttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ccgaagctcctcctgaagaagaagccatcgttcaaatcccgacgaaacgtcggcgtttta 358
Query: 121 gccttcgagatggccggagtgatgtcgaagcttctccacctctggcagtcgctctccgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gccttcgagatggccggagtgatgtcgaagcttctccacctctggcagtcgctctccgac 418
Query: 181 gccaccatcgtccgcatccgaaacgacgccgtcacgctcgagggcgttcggaagatcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gccaccatcgtccgcatccgaaacgacgccgtcacgctcgagggcgttcggaagatcatc 478
Query: 241 tccaacgacgagtcgtttcttctcggactcgcctgcgccgagttcgccgagactctccga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tccaacgacgagtcgtttcttctcggactcgcctgcgccgagttcgccgagactctccga 538
Query: 301 ctcgccgccaactcggtcacccgactcagccaccgctgcgatgatcccaacctcagatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctcgccgccaactcggtcacccgactcagccaccgctgcgatgatcccaacctcagatcc 598
Query: 361 ttccgtaaagccttcctcgagttcgccgactcgggtcgtgatccaaacgggtgggccctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttccgtaaagccttcctcgagttcgccgactcgggtcgtgatccaaacgggtgggccctc 658
Query: 421 tccgttgtgaaggaaaccgaagccaagctgaggaagatggagcgtttcgtgacgctcacg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tccgttgtgaaggaaaccgaagccaagctgaggaagatggagcgtttcgtgacgctcacg 718
Query: 481 gcagcgctgcaccgtg 496
||||||||||||||||
Sbjct: 719 gcagcgctgcaccgtg 734
>gnl|LJGI|TC76604 similar to UniRef100_A7QGU2 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 603
Score = 398 bits (201), Expect = e-110
Identities = 362/413 (87%), Gaps = 2/413 (0%)
Strand = Plus / Plus
Query: 976 aatttgatcattgtgatggagaagatgattaagtcaccacatttggttggtttggatgct 1035
|||||||| ||||||||||||||||||||||||||||| || ||||||||| |||||||
Sbjct: 12 aatttgataattgtgatggagaagatgattaagtcaccccaattggttggtgtggatgca 71
Query: 1036 agggatgatttgtatgctatgttaccaagtagtataaggtcagctttgagggctaggttg 1095
||||||||||||||||||||||||||||| || ||||||| ||| ||| |||| |||
Sbjct: 72 agggatgatttgtatgctatgttaccaagcagcataaggttgtgtttaaggtctagattg 131
Query: 1096 aaaggggtggggttttctgctagtgatcctgtgcttgctggtgagtggagggatgcattg 1155
|||||||| || || |||||| |||||||||||||||||| ||||||| ||||| |||
Sbjct: 132 aaaggggttggattctctgcttgtgatcctgtgcttgctgcagagtggaaagatgctttg 191
Query: 1156 gggaggatattggggtggttgtcaccattggcacataatatgatcaagtggcagagtgaa 1215
||||||||| | |||||||||||||| ||||||||||| ||||| | |||||||||||||
Sbjct: 192 gggaggatacttgggtggttgtcacctttggcacataacatgattaggtggcagagtgaa 251
Query: 1216 aggagctttgagcagcaaaacttggtgcctaagacc-aatgtgttgttgttgcaaacttt 1274
|||||||||||| | || | ||||| | ||||| ||||||||| ||||||| |||||
Sbjct: 252 aggagctttgagaatcagaggttggttgcccagacctaatgtgttgctgttgcagacttt 311
Query: 1275 gttctttgcaaacaagga-gaagacagaggctgctataactgagttgcttgtggggttga 1333
||||||||| || |||| |||| || ||||||||||||||| |||||||||||||||
Sbjct: 312 gttctttgccgaccaggacccagaccgaagctgctataactgagctgcttgtggggttga 371
Query: 1334 actatatttggaggtttgagagggaaatgactgctaaggcattgtttgaatgt 1386
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 actatgtttggaggtttgagagggaaatgactgctaaggcattgtttgaatgt 424
>gnl|LJGI|TC72074 weakly similar to UniRef100_A7QGU2 Cluster: Chromosome chr16
scaffold_94, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_94, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 832
Score = 135 bits (68), Expect = 8e-31
Identities = 128/148 (86%)
Strand = Plus / Plus
Query: 108 cgtcggcgttttagccttcgagatggccggagtgatgtcgaagcttctccacctctggca 167
||||| |||||| ||||||||| | ||||| |||||||| ||||| ||||||||||||||
Sbjct: 395 cgtcgccgttttggccttcgaggtcgccggcgtgatgtccaagctcctccacctctggca 454
Query: 168 gtcgctctccgacgccaccatcgtccgcatccgaaacgacgccgtcacgctcgagggcgt 227
||| ||||||||||||| | |||||||| |||||||||||||||| | |||||||| ||
Sbjct: 455 gtccctctccgacgccagcgtcgtccgcctccgaaacgacgccgtgtcactcgagggagt 514
Query: 228 tcggaagatcatctccaacgacgagtcg 255
||||| |||||||| ||||||||||
Sbjct: 515 ctggaagctcatctccggcgacgagtcg 542
Score = 60.0 bits (30), Expect = 4e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 457 atggagcgtttcgtgacgctcacggcagcgctgcaccgtgagatggaggagctttcggtt 516
|||||||||| |||||||||||||||| |||||||| | || ||||| ||||| ||| |
Sbjct: 744 atggagcgttacgtgacgctcacggcaacgctgcacagagaaatggacgagctatcgctc 803
Query: 517 ttggaa 522
||||||
Sbjct: 804 ttggaa 809