Miyakogusa Predicted Gene

Lj5g3v1208020.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1208020.1 Non Chatacterized Hit- tr|I3SXY5|I3SXY5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,97.67,2e-16,seg,NULL,CUFF.55020.1
         (306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80439 similar to UniRef100_A7NWX8 Cluster: Chromosome...   262   1e-69
gnl|LJGI|TC64305 similar to UniRef100_A7NWX8 Cluster: Chromosome...   111   3e-24

>gnl|LJGI|TC80439 similar to UniRef100_A7NWX8 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (72%)
          Length = 696

 Score =  262 bits (132), Expect = 1e-69
 Identities = 135/136 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaatcgggtggtcctgaatccgcaaaacccatgacccaccggactcattctctgtct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 233 atgcaatcgggtggtcctgaatccgcaaaacccatgacccaccggactcattctcagtct 292

                                                                       
Query: 61  tctgcagatactagagggaagcatagggtacatgctgaactgaaacggacagaacaagaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tctgcagatactagagggaagcatagggtacatgctgaactgaaacggacagaacaagaa 352

                           
Query: 121 gccaagttcttagagg 136
           ||||||||||||||||
Sbjct: 353 gccaagttcttagagg 368


>gnl|LJGI|TC64305 similar to UniRef100_A7NWX8 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (70%)
          Length = 684

 Score =  111 bits (56), Expect = 3e-24
 Identities = 116/136 (85%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaatcgggtggtcctgaatccgcaaaacccatgacccaccggactcattctctgtct 60
           |||||||| ||||| |||||||| | ||| ||||||||| | ||| |||| |||||||||
Sbjct: 276 atgcaatcaggtgggcctgaatcagaaaaccccatgaccgaacgggctcagtctctgtct 335

                                                                       
Query: 61  tctgcagatactagagggaagcatagggtacatgctgaactgaaacggacagaacaagaa 120
           ||||||||||| ||||||||||||||| ||||||| |||||||| |||   || || |||
Sbjct: 336 tctgcagatacaagagggaagcataggatacatgcagaactgaagcggttggagcaggaa 395

                           
Query: 121 gccaagttcttagagg 136
           || | |||||||||||
Sbjct: 396 gcaaggttcttagagg 411