Miyakogusa Predicted Gene
- Lj5g3v1208010.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1208010.2 tr|B6U329|B6U329_MAIZE AGG2 OS=Zea mays PE=4
SV=1,57.47,1e-18,coiled-coil,NULL; seg,NULL; G-gamma,G-protein
gamma-like domain,CUFF.55019.2
(321 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80439 similar to UniRef100_A7NWX8 Cluster: Chromosome... 628 e-180
gnl|LJGI|TC64305 similar to UniRef100_A7NWX8 Cluster: Chromosome... 258 2e-68
gnl|LJGI|FS353708 similar to UniRef100_A7NWX8 Cluster: Chromosom... 90 1e-17
>gnl|LJGI|TC80439 similar to UniRef100_A7NWX8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 696
Score = 628 bits (317), Expect = e-180
Identities = 320/321 (99%)
Strand = Plus / Plus
Query: 1 atgcaatcgggtggtcctgaatccgcaaaacccatgacccaccggactcattctctgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 233 atgcaatcgggtggtcctgaatccgcaaaacccatgacccaccggactcattctcagtct 292
Query: 61 tctgcagatactagagggaagcatagggtacatgctgaactgaaacggacagaacaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tctgcagatactagagggaagcatagggtacatgctgaactgaaacggacagaacaagaa 352
Query: 121 gccaagttcttagaggaagaactggaacagcttgaaaagatggagaaagcatccacatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gccaagttcttagaggaagaactggaacagcttgaaaagatggagaaagcatccacatcg 412
Query: 181 tgcaaagaaatgattagcaatgtggaagcaagacctgatccgttactaccattaactgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tgcaaagaaatgattagcaatgtggaagcaagacctgatccgttactaccattaactgct 472
Query: 241 ggtcctgtaagtccttcatgggataaatggtttgaaggcccccaagattccaaaagctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ggtcctgtaagtccttcatgggataaatggtttgaaggcccccaagattccaaaagctgc 532
Query: 301 tgcagatgttcgattctctga 321
|||||||||||||||||||||
Sbjct: 533 tgcagatgttcgattctctga 553
>gnl|LJGI|TC64305 similar to UniRef100_A7NWX8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (70%)
Length = 684
Score = 258 bits (130), Expect = 2e-68
Identities = 276/324 (85%), Gaps = 3/324 (0%)
Strand = Plus / Plus
Query: 1 atgcaatcgggtggtcctgaatccgcaaaacccatgacccaccggactcattctctgtct 60
|||||||| ||||| |||||||| | ||| ||||||||| | ||| |||| |||||||||
Sbjct: 276 atgcaatcaggtgggcctgaatcagaaaaccccatgaccgaacgggctcagtctctgtct 335
Query: 61 tctgcagatactagagggaagcatagggtacatgctgaactgaaacggacagaacaagaa 120
||||||||||| ||||||||||||||| ||||||| |||||||| ||| || || |||
Sbjct: 336 tctgcagatacaagagggaagcataggatacatgcagaactgaagcggttggagcaggaa 395
Query: 121 gccaagttcttagaggaagaactggaacagcttgaaaagatggagaaagcatccacatcg 180
|| | ||||||||||||||| |||||||| ||||||| |||||| |||||||| |||||
Sbjct: 396 gcaaggttcttagaggaagagctggaacaacttgaaaggatggaaaaagcatctacatca 455
Query: 181 tgcaaagaaatgattagcaatgtggaagcaagacctgatccgttactaccattaactgct 240
|||||||||||| | || ||||||||| |||| || ||||| || ||||| | ||| | |
Sbjct: 456 tgcaaagaaatgctcagtaatgtggaaacaaggccagatcctttgctaccgtcaacagtt 515
Query: 241 ggtcctgtaagtccttcatgggataaatggtttgaaggccc---ccaagattccaaaagc 297
||||| |||| |||| |||||||| |||||| |||||||| ||||||||||||| ||
Sbjct: 516 ggtcccgtaaatcctgcatgggatcgatggttcgaaggcccccaccaagattccaaaggc 575
Query: 298 tgctgcagatgttcgattctctga 321
||||||||||||||||||||||||
Sbjct: 576 tgctgcagatgttcgattctctga 599
>gnl|LJGI|FS353708 similar to UniRef100_A7NWX8 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 649
Score = 89.7 bits (45), Expect = 1e-17
Identities = 84/97 (86%)
Strand = Plus / Minus
Query: 134 aggaagaactggaacagcttgaaaagatggagaaagcatccacatcgtgcaaagaaatga 193
||||||| |||||||| ||||||| |||||| |||||||| ||||| ||||||||||||
Sbjct: 417 aggaagagctggaacaacttgaaaggatggaaaaagcatctacatcatgcaaagaaatgc 358
Query: 194 ttagcaatgtggaagcaagacctgatccgttactacc 230
| || ||||||||| |||| |||||||| || |||||
Sbjct: 357 tcagtaatgtggaaacaaggcctgatcctttgctacc 321
Score = 85.7 bits (43), Expect = 2e-16
Identities = 75/85 (88%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 240 tggtcctgtaagtccttcatgggataaatggtttgaaggccccca---agattccaaaag 296
|||||| |||| |||| |||||||| |||||| ||||||||||| |||||||||| |
Sbjct: 224 tggtcccgtaaatcctgcatgggatcgatggttcgaaggcccccaccaagattccaaagg 165
Query: 297 ctgctgcagatgttcgattctctga 321
|||||||||||||||||||||||||
Sbjct: 164 ctgctgcagatgttcgattctctga 140