Miyakogusa Predicted Gene
- Lj5g3v1207740.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1207740.2 Non Chatacterized Hit- tr|I1LC40|I1LC40_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28878 PE,82.2,0,WDSAM1
PROTEIN,NULL; ARM repeat,Armadillo-type fold; RING/U-box,NULL;
coiled-coil,NULL; no descripti,CUFF.55012.2
(3018 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW596498 weakly similar to UniRef100_A7NWY7 Cluster: Ch... 854 0.0
gnl|LJGI|CN825170 similar to UniRef100_A7NWY6 Cluster: Chromosom... 775 0.0
gnl|LJGI|TC77702 weakly similar to UniRef100_A7NWY6 Cluster: Chr... 767 0.0
>gnl|LJGI|BW596498 weakly similar to UniRef100_A7NWY7 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (29%)
Length = 462
Score = 854 bits (431), Expect = 0.0
Identities = 454/462 (98%)
Strand = Plus / Plus
Query: 296 gaaccatagtcgaagaagttgaaaaagtcacaagggatattggaaagtctctgaatgttc 355
|||||| || ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 gaaccanagacgaagaagttgaacctttcacaagggatattggaaagtctctgaatgttc 60
Query: 356 tttctattgcaaatactcaagttctatcaagaatttcagatcaggttgataggctgcaga 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttctattgcaaatactcaagttctatcaagaatttcagatcaggttgataggctgcaga 120
Query: 416 gtgagatgcaaagtgtggagtttgaggcttcgcaacctcagctccagattgttgacaagt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgagatgcaaagtgtggagtttgaggcttcgcaacctcagctccagattgttgacaagt 180
Query: 476 tgaatcagggaattagagaacagaaactggatcaggcttttgcgaattacatgcttgagg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgaatcagggaattagagaacagaaactggatcaggcttttgcgaattacatgcttgagg 240
Query: 536 agatagcaaaggaagttggggtgccagtggaaccctcagagataagcaaagagatagcca 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatagcaaaggaagttggggtgccagtggaaccctcagagataagcaaagagatagcca 300
Query: 596 gcattaggagagaaaaagaagaagctgccaataggaaagaaaagcttgaattttattttt 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcattaggagagaaaaagaagaagctgccaataggaaagaaaagcttgaattttattttt 360
Query: 656 tggagcagatcattcagttgctctctcgagctgacgcggcgagggattatgaagaggtta 715
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 361 tggagcagatcattcagttgctctctcgccctgacgcggcgagggattatgaagaggtta 420
Query: 716 agaatcagtactttgaaagggttaaggtgatacagagatatg 757
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agaatcagtactttgaaagggttaaggtgatacagagatatg 462
>gnl|LJGI|CN825170 similar to UniRef100_A7NWY6 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 539
Score = 775 bits (391), Expect = 0.0
Identities = 406/411 (98%)
Strand = Plus / Plus
Query: 1979 agactagtttggtgaaaaaagcaattcttgcagccaatggtgtatctcaaattctcccac 2038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agactagtttggtgaaaaaagcaattcttgcagccaatggtgtatctcaaattctcccac 188
Query: 2039 ttcttgatgactctgactcagaaatcagagaaaccgccataaacttgctctttcttttct 2098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ttcttgatgactctgactcagaaatcagagaaaccgccataaacttgctctttcttttct 248
Query: 2099 cccagcatgagcctgaaggagtagttgaatatctcttcaagcctagaaggctggaagctc 2158
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cccagcatgttcctgaaggagtagttgaatatctcttcaagcctagaaggctggaagctc 308
Query: 2159 tgattggacttcttgagaatgaagacaatgacaatgtacagatggctgcagcaggattac 2218
|||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgattgtacttcttgacaatgaggacaatgacaatgtacagatggctgcagcaggattac 368
Query: 2219 tagcaaacctgccgaaatcggaacgagaactcaccatgaagctgattaaaatgggaggac 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tagcaaacctgccgaaatcggaacgagaactcaccatgaagctgattaaaatgggaggac 428
Query: 2279 ttgatgcaatcataagcattttgaaaactggcaaaatggaagccaaagagaatgctctca 2338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttgatgcaatcataagcattttgaaaactggcaaaatggaagccaaagagaatgctctca 488
Query: 2339 gtgcactcttcaggttcacagaccctactgatatcgagtcacagcgtgacc 2389
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtgcactcttcaggttcacagaccctactgatatcgagtcacagcgtgacc 539
Score = 168 bits (85), Expect = 1e-40
Identities = 97/101 (96%)
Strand = Plus / Plus
Query: 1878 tggagaagggaaacagcttgagttagattccatcatcaccaatttgctatccctgcagca 1937
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 1 tggagaagggaaacagcttgagttagattcctttttcaccaatttgctatccctgcagca 60
Query: 1938 gagttctagctcaggtcacagcttgcgtaagcctacactac 1978
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagctctagctcaggtcacagcttgcgtaagcctacactac 101
>gnl|LJGI|TC77702 weakly similar to UniRef100_A7NWY6 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 395
Score = 767 bits (387), Expect = 0.0
Identities = 387/387 (100%)
Strand = Plus / Plus
Query: 2449 gcaaaggcaagagcagcagctttcattggtgatctttccatgagtactccaaatctcacc 2508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gcaaaggcaagagcagcagctttcattggtgatctttccatgagtactccaaatctcacc 68
Query: 2509 gtcgtttccaaatcacccggttgctggtttttaagatcgtcgcgagttcctctatgttca 2568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gtcgtttccaaatcacccggttgctggtttttaagatcgtcgcgagttcctctatgttca 128
Query: 2569 gcacatgatagcttatgcagtgtgatcaccacattttgtctattggaagcagatgctttg 2628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gcacatgatagcttatgcagtgtgatcaccacattttgtctattggaagcagatgctttg 188
Query: 2629 cctggtttgataaagctgttacatggggaagttcatgcaactgcttatgaggccattcag 2688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cctggtttgataaagctgttacatggggaagttcatgcaactgcttatgaggccattcag 248
Query: 2689 acactttccacattggttttggaagagtgtcctcaaaggggggctcatgtgttgcatgag 2748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 acactttccacattggttttggaagagtgtcctcaaaggggggctcatgtgttgcatgag 308
Query: 2749 gcaaatgcaatgagacccttgttggacattttaaattggggaagtgattctctcaaggca 2808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcaaatgcaatgagacccttgttggacattttaaattggggaagtgattctctcaaggca 368
Query: 2809 gaagctctaggacttttggagaaggtt 2835
|||||||||||||||||||||||||||
Sbjct: 369 gaagctctaggacttttggagaaggtt 395