Miyakogusa Predicted Gene

Lj5g3v1206650.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1206650.2 tr|B9IQW0|B9IQW0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_915042 PE=4
SV=1,29.67,0.000000000000009,FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.55004.2
         (747 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71153 similar to UniRef100_A7NWZ3 Cluster: Chromosome...   829   0.0  

>gnl|LJGI|TC71153 similar to UniRef100_A7NWZ3 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 775

 Score =  829 bits (418), Expect = 0.0
 Identities = 418/418 (100%)
 Strand = Plus / Plus

                                                                       
Query: 330 agtaggagtcaaggtgcataatctagttgcagaaattgttgattcaaaattggggaaaca 389
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   agtaggagtcaaggtgcataatctagttgcagaaattgttgattcaaaattggggaaaca 60

                                                                       
Query: 390 aatcactagaatcaagccatcagtgacctatattgcagcagaggaaataatgagccttgt 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aatcactagaatcaagccatcagtgacctatattgcagcagaggaaataatgagccttgt 120

                                                                       
Query: 450 tacagctcaggtgacggagaacagtgaactgaatgaagtttggaaagacgtactaaatgc 509
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacagctcaggtgacggagaacagtgaactgaatgaagtttggaaagacgtactaaatgc 180

                                                                       
Query: 510 agacggtgatgaaatatatgtgaaggacattggcctttacatgaaagaaggagagaatcc 569
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agacggtgatgaaatatatgtgaaggacattggcctttacatgaaagaaggagagaatcc 240

                                                                       
Query: 570 atcatttactgagctttctgagagagcatatttaaggagagaagtagccataggctatgt 629
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcatttactgagctttctgagagagcatatttaaggagagaagtagccataggctatgt 300

                                                                       
Query: 630 gaagaacaacaagaatgtaatcaatccagttcccaagtcagaacccctctctcttgaaat 689
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaagaacaacaagaatgtaatcaatccagttcccaagtcagaacccctctctcttgaaat 360

                                                                     
Query: 690 gactgactcattgatagtgatatctgagctggaaggagaacaacccgtcgtgttgtaa 747
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gactgactcattgatagtgatatctgagctggaaggagaacaacccgtcgtgttgtaa 418