Miyakogusa Predicted Gene
- Lj5g3v1201250.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1201250.1 Non Chatacterized Hit- tr|I1KK11|I1KK11_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.24,0,coiled-coil,NULL; seg,NULL; Slu7,Pre-mRNA splicing
Prp18-interacting factor; STEP II SPLICING FACTOR,CUFF.54963.1
(1623 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76179 similar to UniRef100_A7NXC0 Cluster: Chromosome... 246 4e-64
gnl|LJGI|GO010765 homologue to UniRef100_Q9SHY8 Cluster: Pre-mRN... 155 1e-36
gnl|LJGI|TC67323 similar to UniRef100_A7NXC0 Cluster: Chromosome... 66 7e-10
>gnl|LJGI|TC76179 similar to UniRef100_A7NXC0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (51%)
Length = 907
Score = 246 bits (124), Expect = 4e-64
Identities = 562/708 (79%)
Strand = Plus / Plus
Query: 615 tctaaaggttgatgaagccaaggttgatgagagcaaacaggcggactttgccaaggttga 674
||||| ||| ||||| || |||||||||||||||||||| ||| ||||| ||||||||
Sbjct: 69 tctaagggtagatgaggcaaaggttgatgagagcaaacaaatggattttgcaaaggttga 128
Query: 675 aaagcgtgttagaacaacaggaggtggtagtacaggaactgtaagaaacttgcgtatccg 734
||||| || | ||||| || ||||| |||||||||||||| || ||| | ||||| ||
Sbjct: 129 gaagcgagtacgtacaactggtggtgggagtacaggaactgtgaggaacctacgtattcg 188
Query: 735 agaggacactgcaaaataccttctgaatcttgatgtcaattctccttattatgatccaaa 794
|||||| ||||||||||| ||||| |||||||| ||||||||| || |||||||||| ||
Sbjct: 189 agaggatactgcaaaatatcttcttaatcttgaggtcaattctgctcattatgatcccaa 248
Query: 795 aacccattctatgcgagaggatccccttcctgatgctgatcctaatgagaagttctatgg 854
||| || ||||| || ||||| ||||| ||||| ||||| ||||||||||| |||
Sbjct: 249 gaccaggtcaatgcgtgaagatcctcttccagatgcagatccaaatgagaagttttatct 308
Query: 855 aggagacaaccagtatagaatgagtggacaagctttggagttcaagcaacttaacattca 914
|| || ||||| ||||||| ||||| ||||||||||| |||||| || ||||| ||
Sbjct: 309 gggtgataaccaatatagaaatagtggtcaagctttggaattcaaggaaggaaacatcca 368
Query: 915 tgcctgggaagcatttgagaaaggccaggatgtccacatacaagctgcaccttcccaagc 974
||| |||||||||||||| || || || ||||| || || ||||| || || ||||||||
Sbjct: 369 tgcttgggaagcatttgacaaggggcaagatgttcatatgcaagcagctccatcccaagc 428
Query: 975 tgaattactatataagaattttaagataatgaaagagaagttgaagtcacaaacaaaaga 1034
|||||| || ||||||||||| ||| | ||||| ||||| |||||||| |||||||| ||
Sbjct: 429 tgaattgctctataagaatttcaaggtcatgaaggagaaattgaagtctcaaacaaagga 488
Query: 1035 tgccataatacagaagtatggaaatgcagcagcccaagaagagcttccaaaggagcttct 1094
| | || | |||||||||| |||||||| | | || | ||||||| || |||||
Sbjct: 489 tactatcctcgagaagtatggcaatgcagctgatgaggacaaacttccaagagaacttct 548
Query: 1095 tttggggcaaactgagagacaagtcgaatatgatcgcgctggcagaattataaaaggcct 1154
| || || | |||| | ||||| || |||||||| ||||| |||||||| || || |
Sbjct: 549 gcttggtcagagtgagggccaagttgagtatgatcgtgctggtagaattattaagggaca 608
Query: 1155 ggaggcatcccttccaaaaagcaagtatgaagaggatgtgtacattaataatcacacaag 1214
||| ||| | | || | |||||||||||||| ||||| |||||||| || |||||||
Sbjct: 609 ggaagcagcagtccccaggagcaagtatgaagaagatgtttacattaacaaccacacaac 668
Query: 1215 catatggggttcatggtggaatgatcatcaatggggatacaaatgttgcaagcaaactat 1274
| ||||| || |||||||| ||||| |||||||| | ||| ||||||||||| || ||
Sbjct: 669 tgtttggggctcttggtggaaggatcaccaatggggcttcaagtgttgcaagcagacaat 728
Query: 1275 acggaacagttactgcactggcgcagcaggaattgaggctgctgaggc 1322
||| || || || || || || || || || |||| ||||||||||||
Sbjct: 729 acgtaatagctattgtaccggtgctgctggtattgcggctgctgaggc 776
>gnl|LJGI|GO010765 homologue to UniRef100_Q9SHY8 Cluster: Pre-mRNA-splicing factor
SLU7-A; n=1; Arabidopsis thaliana|Rep: Pre-mRNA-splicing
factor SLU7-A - Arabidopsis thaliana (Mouse-ear cress),
partial (16%)
Length = 436
Score = 155 bits (78), Expect = 1e-36
Identities = 147/170 (86%)
Strand = Plus / Plus
Query: 46 aaacagattgaattggaagaggcacgtaaagctgggcttgcaccagctgaggtagatgaa 105
||||||||||| ||||| || || ||||||||||||||||| ||||||||||| || |||
Sbjct: 89 aaacagattgagttggaggaagcccgtaaagctgggcttgctccagctgaggtggacgaa 148
Query: 106 gatgggaaggagattaaccctcatatcccccaatatatgtcttctgctccatggtatctg 165
||||| ||||| || || || ||||| || || ||||||||||| || || ||||||||
Sbjct: 149 gatggaaaggaaatcaatccccatattccgcagtatatgtcttccgcgccttggtatctt 208
Query: 166 aatgctgagaaacctagtctaaaacatcaaaggaaatggaaatctgatcc 215
|||||||||| ||||||| | ||||||||||||||||||| |||||||||
Sbjct: 209 aatgctgagagacctagtttgaaacatcaaaggaaatggagatctgatcc 258
>gnl|LJGI|TC67323 similar to UniRef100_A7NXC0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (39%)
Length = 961
Score = 65.9 bits (33), Expect = 7e-10
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 1174 agcaagtatgaagaggatgtgtacattaataatcacacaagcatatggggttcatggtgg 1233
|||||||||||||| ||||| |||||||| || ||||||| | ||||| || ||||||
Sbjct: 200 agcaagtatgaagaagatgtttacattaacaaccacacaactgtttggggctcttggtgg 259
Query: 1234 aatgatcatcaatggggatacaaatgttgcaagcaaactatacggaacagttactgcact 1293
|| || || |||||||| | ||| ||||||||||| || ||||| || || || || ||
Sbjct: 260 aaggaccaccaatggggcttcaagtgttgcaagcagacaatacgtaatagctattgtacc 319
Query: 1294 ggcgcagcaggaattgaggctgctgaggc 1322
|| || || || |||| ||||||||||||
Sbjct: 320 ggtgctgctggtattgcggctgctgaggc 348
Score = 56.0 bits (28), Expect = 7e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1390 gaggaaaaaaggcttgctacttggggaactgatgtacctgatga 1433
||||| |||||||| ||||| |||||||||||||| ||||||||
Sbjct: 416 gaggagaaaaggctggctacatggggaactgatgtccctgatga 459