Miyakogusa Predicted Gene
- Lj5g3v1201210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1201210.1 Non Chatacterized Hit- tr|I3T6A8|I3T6A8_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,68.92,3e-18,seg,NULL; DUF640,Domain of unknown function DUF640;
FAMILY NOT NAMED,NULL,CUFF.54959.1
(468 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77999 homologue to UniRef100_A7Q1S2 Cluster: Chromoso... 80 1e-14
gnl|LJGI|TC70079 similar to UniRef100_Q0DZF3 Cluster: Os02g06234... 54 8e-07
gnl|LJGI|TC69284 homologue to UniRef100_A7Q1S2 Cluster: Chromoso... 54 8e-07
>gnl|LJGI|TC77999 homologue to UniRef100_A7Q1S2 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 916
Score = 79.8 bits (40), Expect = 1e-14
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 359 agccgctacgagaaccaaaaacgccgagactggaacacgttcggccagtacctccgcaat 418
||||| ||||||||||| || || |||||||||||||||||| |||||||||| || ||
Sbjct: 779 agccgttacgagaaccagaagcggcgagactggaacacgttctgccagtaccttcgaaac 838
Query: 419 caccgtcctccactcaccctctctcgctgcagcggcgctcacgt 462
|||||||| || || | || |||| |||||||||||| |||||
Sbjct: 839 caccgtccgccgctgtcgctgtctctctgcagcggcgcgcacgt 882
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 160 agccgctacgagaaccaaaaacgccgagactggaacacgttcggccagtacctccgcaat 219
||||| ||||||||||| || || |||||||||||||||||| |||||||||| || ||
Sbjct: 779 agccgttacgagaaccagaagcggcgagactggaacacgttctgccagtaccttcgaaac 838
Query: 220 caccgtcctccactcaccctctctcgctgcagcggcgc 257
|||||||| || || | || |||| ||||||||||||
Sbjct: 839 caccgtccgccgctgtcgctgtctctctgcagcggcgc 876
>gnl|LJGI|TC70079 similar to UniRef100_Q0DZF3 Cluster: Os02g0623400 protein; n=2;
Oryza sativa|Rep: Os02g0623400 protein - Oryza sativa
subsp. japonica (Rice), partial (35%)
Length = 601
Score = 54.0 bits (27), Expect = 8e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 159 cagccgctacgagaaccaaaaacgccgagactggaacacgttcggccagtacctc 213
||||||||| |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 378 cagccgctatgagaaccagaagcgccgtgactggaacacctttggtcagtacctc 432
Score = 54.0 bits (27), Expect = 8e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 358 cagccgctacgagaaccaaaaacgccgagactggaacacgttcggccagtacctc 412
||||||||| |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 378 cagccgctatgagaaccagaagcgccgtgactggaacacctttggtcagtacctc 432
>gnl|LJGI|TC69284 homologue to UniRef100_A7Q1S2 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 632
Score = 54.0 bits (27), Expect = 8e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 159 cagccgctacgagaaccaaaaacgccgagactggaacacgttcggccagtacctc 213
||||||||| |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 447 cagccgctatgagaaccagaagcgccgtgactggaacacctttggtcagtacctc 501
Score = 54.0 bits (27), Expect = 8e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 358 cagccgctacgagaaccaaaaacgccgagactggaacacgttcggccagtacctc 412
||||||||| |||||||| || ||||| ||||||||||| || || |||||||||
Sbjct: 447 cagccgctatgagaaccagaagcgccgtgactggaacacctttggtcagtacctc 501