Miyakogusa Predicted Gene
- Lj5g3v1176940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1176940.1 Non Chatacterized Hit- tr|I3S398|I3S398_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.19,0,Ribosomal_L14e,Ribosomal protein L14; SUBFAMILY NOT
NAMED,NULL; 60S RIBOSOMAL PROTEIN L14,NULL; no
d,NODE_22634_length_378_cov_1010.415344.path2.1
(375 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60249 homologue to UniRef100_Q3HVK7 Cluster: Glycopro... 743 0.0
gnl|LJGI|TC70302 similar to UniRef100_A7NXE0 Cluster: Chromosome... 319 7e-87
gnl|LJGI|BP063846 similar to UniRef100_P55844 Cluster: Probable ... 66 2e-10
>gnl|LJGI|TC60249 homologue to UniRef100_Q3HVK7 Cluster: Glycoprotein-like protein;
n=1; Solanum tuberosum|Rep: Glycoprotein-like protein -
Solanum tuberosum (Potato), partial (97%)
Length = 748
Score = 743 bits (375), Expect = 0.0
Identities = 375/375 (100%)
Strand = Plus / Plus
Query: 1 atgccgttcaagaggttcgttgaggtagggagggtggctctcgtcaactatggcaaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgccgttcaagaggttcgttgaggtagggagggtggctctcgtcaactatggcaaggat 131
Query: 61 tatggcaggcttgtcgtgattgtggatatcattgaccagaacagggctcttattgatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tatggcaggcttgtcgtgattgtggatatcattgaccagaacagggctcttattgatgcc 191
Query: 121 cctgacatggagaggtctcaaatgaatctcaagaggctttccctcactgacatcaagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cctgacatggagaggtctcaaatgaatctcaagaggctttccctcactgacatcaagatt 251
Query: 181 gacatcaaaagggttcccaagaagaaggatctgattgctgccatggaagctgcagatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gacatcaaaagggttcccaagaagaaggatctgattgctgccatggaagctgcagatgtt 311
Query: 241 aagaacaagtgggagaaaagctcctggggtaggaaactcattgtcaggaagagaagggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aagaacaagtgggagaaaagctcctggggtaggaaactcattgtcaggaagagaagggct 371
Query: 301 tccctcaatgattttgataggttcaagatcatgttggcaaagatcaagagggccggtgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tccctcaatgattttgataggttcaagatcatgttggcaaagatcaagagggccggtgct 431
Query: 361 gttaggacagagctt 375
|||||||||||||||
Sbjct: 432 gttaggacagagctt 446
>gnl|LJGI|TC70302 similar to UniRef100_A7NXE0 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 726
Score = 319 bits (161), Expect = 7e-87
Identities = 305/353 (86%)
Strand = Plus / Plus
Query: 1 atgccgttcaagaggttcgttgaggtagggagggtggctctcgtcaactatggcaaggat 60
||||| |||||||||||||||||| | || ||||| ||||| || ||||||||||||||
Sbjct: 66 atgcctttcaagaggttcgttgagattggaagggttgctctggttaactatggcaaggag 125
Query: 61 tatggcaggcttgtcgtgattgtggatatcattgaccagaacagggctcttattgatgcc 120
||||| ||||| ||||| || || |||||||||||||||||||| |||||| ||||||||
Sbjct: 126 tatgggaggctcgtcgtcatcgtcgatatcattgaccagaacagagctcttgttgatgcc 185
Query: 121 cctgacatggagaggtctcaaatgaatctcaagaggctttccctcactgacatcaagatt 180
||||| |||| ||| || ||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 186 cctgatatggtgagatcccaaatgaatctcaagaggctttccctcactgacattaaggtt 245
Query: 181 gacatcaaaagggttcccaagaagaaggatctgattgctgccatggaagctgcagatgtt 240
|| || || ||||| || |||||||||||||||||| || ||||| ||||| ||||||
Sbjct: 246 gatattaagagggtccctaagaagaaggatctgattcaagcaatggaggctgctgatgtt 305
Query: 241 aagaacaagtgggagaaaagctcctggggtaggaaactcattgtcaggaagagaagggct 300
||||||||||||||||| ||||| ||||| | ||||| ||||| | ||||||| ||||
Sbjct: 306 aagaacaagtgggagaatagctcatggggccgaaaactgattgtgaagaagagacgggca 365
Query: 301 tccctcaatgattttgataggttcaagatcatgttggcaaagatcaagagggc 353
| || ||||||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct: 366 gctctgaatgattttgataggtttaagataatgttgacaaagatcaagagggc 418
>gnl|LJGI|BP063846 similar to UniRef100_P55844 Cluster: Probable 60S ribosomal protein
L14; n=1; Pisum sativum|Rep: Probable 60S ribosomal
protein L14 - Pisum sativum (Garden pea), partial (34%)
Length = 373
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 307 aatgattttgataggttcaagatcatgttggcaaagatcaagagggccggtgctgttagg 366
||||||||||||||||| ||||| |||||| | |||||| |||||||| |||||| |||
Sbjct: 200 aatgattttgataggtttaagataatgttgaccaagatccagagggccactgctgtaagg 141
Query: 367 acagagctt 375
||||||||
Sbjct: 140 ccagagctt 132