Miyakogusa Predicted Gene

Lj5g3v1176870.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1176870.1 Non Chatacterized Hit- tr|I1NI73|I1NI73_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,83.27,0,coiled-coil,NULL; seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; P-loop containing nucle,CUFF.54937.1
         (2313 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81465 homologue to UniRef100_O23291 Cluster: Kinesin ...   624   e-178

>gnl|LJGI|TC81465 homologue to UniRef100_O23291 Cluster: Kinesin like protein; n=1;
            Arabidopsis thaliana|Rep: Kinesin like protein -
            Arabidopsis thaliana (Mouse-ear cress), partial (3%)
          Length = 676

 Score =  624 bits (315), Expect = e-178
 Identities = 315/315 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1999 gtatgttctgttgacaagcctagtgctgctagcccttttgcaattcatagcagaagtcca 2058
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205  gtatgttctgttgacaagcctagtgctgctagcccttttgcaattcatagcagaagtcca 264

                                                                        
Query: 2059 aagagagaggatcatagtttcaagggaaattcagtggatgacaaggaaaatggatctaga 2118
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265  aagagagaggatcatagtttcaagggaaattcagtggatgacaaggaaaatggatctaga 324

                                                                        
Query: 2119 ctactgagaattcaaaatatattcactctttgtgggaaccaaagagagctgtcccagcac 2178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325  ctactgagaattcaaaatatattcactctttgtgggaaccaaagagagctgtcccagcac 384

                                                                        
Query: 2179 attggaaccccagtaccttcaaaaaagaggtctgatgaaactcttgatctcaagttttct 2238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385  attggaaccccagtaccttcaaaaaagaggtctgatgaaactcttgatctcaagttttct 444

                                                                        
Query: 2239 cctgtgaaggattctgttttgaaagtctccaacaaggagaacatgggacctcataatgtt 2298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445  cctgtgaaggattctgttttgaaagtctccaacaaggagaacatgggacctcataatgtt 504

                           
Query: 2299 gtgggaaattagtca 2313
            |||||||||||||||
Sbjct: 505  gtgggaaattagtca 519



 Score =  220 bits (111), Expect = 3e-56
 Identities = 111/111 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1795 gtgcaagacttctcaaatcaactttgtccaaacattctgaatggtgcacaagaagatact 1854
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gtgcaagacttctcaaatcaactttgtccaaacattctgaatggtgcacaagaagatact 60

                                                               
Query: 1855 tatgcttctgcaccaaactttggtcaaagagcaggtctcagtacagtgtat 1905
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tatgcttctgcaccaaactttggtcaaagagcaggtctcagtacagtgtat 111