Miyakogusa Predicted Gene

Lj5g3v1176670.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1176670.1 Non Chatacterized Hit- tr|C6T5N3|C6T5N3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9678 PE=,72.31,2e-19,no
description,Nucleic acid-binding,
OB-fold,gene.Ljchr5_pseudomol_20120830.path1.gene3871.1
         (196 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75379 similar to UniRef100_A7NX05 Cluster: Chromosome...   256   4e-68

>gnl|LJGI|TC75379 similar to UniRef100_A7NX05 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (91%)
          Length = 765

 Score =  256 bits (129), Expect = 4e-68
 Identities = 179/196 (91%), Gaps = 6/196 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgattaccgctactttcctggtgagaatgcttacttcatgaatgaaaaatcatcc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 440 atggctgattaccgctactttcctggtgagaatgcttacttcatgaatgaaaaagcatcc 499

                                                                       
Query: 61  aagattgcgaatgatgtcacggtccgctttttagtgatcggtacaaggtggatggagaca 120
           ||||||||||| ||||||||| |||||||| ||||||||||||||| |||||||||| ||
Sbjct: 500 aagattgcgaaggatgtcacgatccgctttgtagtgatcggtacaaagtggatggaggca 559

                                                                       
Query: 121 aaaagggggtttgaacttcatgccttggtcagtttggaaggcaattatcttggaccaatt 180
            |||||| ||      |||| ||||||||||||||||||||| ||||||| |||||||||
Sbjct: 560 gaaagggagt------ttcaagccttggtcagtttggaaggcgattatctgggaccaatt 613

                           
Query: 181 gcatcccctgatatct 196
           ||||||||||||||||
Sbjct: 614 gcatcccctgatatct 629