Miyakogusa Predicted Gene

Lj5g3v1174300.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1174300.1 tr|A9RXM1|A9RXM1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71882
,27.27,0.00000000000004,no description,DNA double-strand break repair
and VJ recombination XRCC4, N-terminal; no description,CUFF.54888.1
         (786 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71441 similar to UniRef100_A7NX21 Cluster: Chromosome...   858   0.0  
gnl|LJGI|TC79289                                                      387   e-107

>gnl|LJGI|TC71441 similar to UniRef100_A7NX21 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (55%)
          Length = 546

 Score =  858 bits (433), Expect = 0.0
 Identities = 436/437 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggagacaaagaggcacacatgcctgaagctccagattccaaatgccaacgaaacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atggaggagacaaagaggcacacatgcctgaagctccagattccaaatgccaacgaaacc 169

                                                                       
Query: 61  atattcgtgaagggcacttggtttgacacccacttcgacctcgccatcaccgacggcgtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atattcgtgaagggcacttggtttgacacccacttcgacctcgccatcaccgacggcgtc 229

                                                                       
Query: 121 gccgcctggcactgccacgcttcggaggatgaagtcaagcagcgtgctgctcagtgggac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gccgcctggcactgccacgcttcggaggatgaagtcaagcagcgtgctgctcagtgggac 289

                                                                       
Query: 181 caaccagtttctgagtacgtggaaatgtctgaacgctacttggggtttcagcaacctggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 caaccagtttctgagtacgtggaaatgtctgaacgctacttggggtttcagcaacctggt 349

                                                                       
Query: 241 tctgtgtatgcatttgctgatcctggtgatggccataagaggttgtcgtggacctttgag 300
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tctgtgtatgcatttgctgatgctggtgatggccataagaggttgtcgtggacctttgag 409

                                                                       
Query: 301 aaggaaggaatgacgctgcaatggagatggaaatgtttgcagtcttctgattgtaagaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 aaggaaggaatgacgctgcaatggagatggaaatgtttgcagtcttctgattgtaagaaa 469

                                                                       
Query: 361 actactgcagaaatattggactttctaatggatgcaaacataacacttagtgaagaagtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 actactgcagaaatattggactttctaatggatgcaaacataacacttagtgaagaagtt 529

                            
Query: 421 gtcagaaaaaatgaatt 437
           |||||||||||||||||
Sbjct: 530 gtcagaaaaaatgaatt 546


>gnl|LJGI|TC79289 
          Length = 408

 Score =  387 bits (195), Expect = e-107
 Identities = 195/195 (100%)
 Strand = Plus / Plus

                                                                       
Query: 592 tcaaaacaagataaagctgagaaatctcctccacaagaggaagaagacacagacaaaaca 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tcaaaacaagataaagctgagaaatctcctccacaagaggaagaagacacagacaaaaca 60

                                                                       
Query: 652 gagagttttgatggggacagtgattttgacaaaagcgatgaagaatctgaaaaggatatt 711
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gagagttttgatggggacagtgattttgacaaaagcgatgaagaatctgaaaaggatatt 120

                                                                       
Query: 712 actagttcttcaaaggatgttattagagcaaggaagccttctgggcgaaagagaactact 771
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 actagttcttcaaaggatgttattagagcaaggaagccttctgggcgaaagagaactact 180

                          
Query: 772 agactcacatgacat 786
           |||||||||||||||
Sbjct: 181 agactcacatgacat 195