Miyakogusa Predicted Gene

Lj5g3v1172180.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1172180.2 Non Chatacterized Hit- tr|I1NI47|I1NI47_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,76.54,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
CRM,RNA-binding, CRM domain; no description,RNA-bin,CUFF.54882.2
         (2043 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP063860 similar to UniRef100_A7NX06 Cluster: Chromosom...   591   e-168

>gnl|LJGI|BP063860 similar to UniRef100_A7NX06 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 572

 Score =  591 bits (298), Expect = e-168
 Identities = 309/312 (99%), Gaps = 2/312 (0%)
 Strand = Plus / Minus

                                                                       
Query: 271 agtaccatggataggattgttgaaaaattgaagaagtttgggtatgttgatgggattgag 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agtaccatggataggattgttgaaaaattgaagaagtttgggtatgttgatgggattgag 258

                                                                       
Query: 331 gagcagagtagaacaaaagagagagtaattgaaaaagggtccgttgaggatatattttat 390
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gagcagagtagaacnaaagagagagtaattgaaaaagggtccgttgaggatatattttat 198

                                                                       
Query: 391 gtggaggaaggattgttgcctaatacaagaggtgggttttctccagaatctccatttgga 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gtggaggaaggattgttgcctaatacaagaggtgggttttctccagaatctccatttgga 138

                                                                       
Query: 451 attggaagtgttggaagtgataatagggtggtgaggtttccatgggagaagccgatggat 510
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 attggaagtgttggaagtgataatagggtggtgaggtttccatgggagaagccgatggat 78

                                                                       
Query: 511 aacgaggttgaagagacgaggcctcaaaggagaaaaagtaagacatatctcgccgaattg 570
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 77  aacgaggttgaagagacgaggcctcaaaggagaaaaagta--acatatctcgccgaattg 20

                       
Query: 571 actcttcctgag 582
           ||||||||||||
Sbjct: 19  actcttcctgag 8



 Score =  266 bits (134), Expect = 5e-70
 Identities = 136/137 (99%)
 Strand = Plus / Minus

                                                                       
Query: 94  agtgagagctggttgagacggtggaatgaacccacctgcaaacacaatcgtccgaaaccg 153
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agtgagagctggttgagacggtggaatgaacccacctgcaaacacaatcgtccgaaaccg 435

                                                                       
Query: 154 ccgcgtgcggtgttagattatcaaggttctggaaatgggcatgagtcaaaatatggtttt 213
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 434 ccgcgtgcggtgttagattatcaaggttctggaaatgggcatgagtcnaaatatggtttt 375

                            
Query: 214 gaaagctcagatgaaga 230
           |||||||||||||||||
Sbjct: 374 gaaagctcagatgaaga 358