Miyakogusa Predicted Gene

Lj5g3v1145220.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1145220.1 Non Chatacterized Hit- tr|K4DDC4|K4DDC4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,30.19,3e-18,seg,NULL,
NODE_86116_length_1632_cov_26.860907.path2.1
         (1150 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78299 similar to UniRef100_A7QB14 Cluster: Chromosome...   583   e-166

>gnl|LJGI|TC78299 similar to UniRef100_A7QB14 Cluster: Chromosome chr5 scaffold_72,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_72, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (5%)
          Length = 643

 Score =  583 bits (294), Expect = e-166
 Identities = 294/294 (100%)
 Strand = Plus / Plus

                                                                        
Query: 857  atgagtttgactgttgtagatgcttgtcagatgaagaagaccttggcaatgatcgtggta 916
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atgagtttgactgttgtagatgcttgtcagatgaagaagaccttggcaatgatcgtggta 60

                                                                        
Query: 917  gcaataggttagcaagtactcaaactgaagacaatgctgatggcagtggaaaattgaact 976
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gcaataggttagcaagtactcaaactgaagacaatgctgatggcagtggaaaattgaact 120

                                                                        
Query: 977  gtgatgtgggactgtctgaaactgagggcaatgaactggaaattgatggccatgacaaag 1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gtgatgtgggactgtctgaaactgagggcaatgaactggaaattgatggccatgacaaag 180

                                                                        
Query: 1037 aaatgcttccatctttgttatcatgttcaggtgctgagtccataagcactgatggtggtg 1096
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aaatgcttccatctttgttatcatgttcaggtgctgagtccataagcactgatggtggtg 240

                                                                  
Query: 1097 gtctagctgcttcaagggatgatgattcagattggagactttacgggacatgaa 1150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gtctagctgcttcaagggatgatgattcagattggagactttacgggacatgaa 294