Miyakogusa Predicted Gene

Lj5g3v1135080.4

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1135080.4 tr|Q53M54|Q53M54_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=Os11g0247500 PE=2
SV=1,43.75,0.0000000004,seg,NULL,CUFF.54869.4
         (1566 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78299 similar to UniRef100_A7QB14 Cluster: Chromosome...   581   e-165
gnl|LJGI|FS325264 similar to UniRef100_A7QB14 Cluster: Chromosom...   416   e-115
gnl|LJGI|TC59150 similar to UniRef100_A7QB14 Cluster: Chromosome...   353   2e-96

>gnl|LJGI|TC78299 similar to UniRef100_A7QB14 Cluster: Chromosome chr5 scaffold_72,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_72, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (5%)
          Length = 643

 Score =  581 bits (293), Expect = e-165
 Identities = 293/293 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1274 atgagtttgactgttgtagatgcttgtcagatgaagaagaccttggcaatgatcgtggta 1333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atgagtttgactgttgtagatgcttgtcagatgaagaagaccttggcaatgatcgtggta 60

                                                                        
Query: 1334 gcaataggttagcaagtactcaaactgaagacaatgctgatggcagtggaaaattgaact 1393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gcaataggttagcaagtactcaaactgaagacaatgctgatggcagtggaaaattgaact 120

                                                                        
Query: 1394 gtgatgtgggactgtctgaaactgagggcaatgaactggaaattgatggccatgacaaag 1453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gtgatgtgggactgtctgaaactgagggcaatgaactggaaattgatggccatgacaaag 180

                                                                        
Query: 1454 aaatgcttccatctttgttatcatgttcaggtgctgagtccataagcactgatggtggtg 1513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  aaatgcttccatctttgttatcatgttcaggtgctgagtccataagcactgatggtggtg 240

                                                                 
Query: 1514 gtctagctgcttcaagggatgatgattcagattggagactttacgggacatga 1566
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  gtctagctgcttcaagggatgatgattcagattggagactttacgggacatga 293


>gnl|LJGI|FS325264 similar to UniRef100_A7QB14 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 780

 Score =  416 bits (210), Expect = e-115
 Identities = 210/210 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaaagcttgtgtcggataaggcgcgggtgaataagaagaaccctccttgcctctac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atgaaaaagcttgtgtcggataaggcgcgggtgaataagaagaaccctccttgcctctac 630

                                                                       
Query: 61  cagtggcagtctggtaaaaaatctggctccaggactggccaaaagtctaagcctttggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 cagtggcagtctggtaaaaaatctggctccaggactggccaaaagtctaagcctttggat 690

                                                                       
Query: 121 gaaaatggcaagtttttacctacattaccatctgcatccaaggagttaaaggaaaaggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 gaaaatggcaagtttttacctacattaccatctgcatccaaggagttaaaggaaaaggag 750

                                         
Query: 181 gatatcctgggaaggataaatgataatgct 210
           ||||||||||||||||||||||||||||||
Sbjct: 751 gatatcctgggaaggataaatgataatgct 780


>gnl|LJGI|TC59150 similar to UniRef100_A7QB14 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 760

 Score =  353 bits (178), Expect = 2e-96
 Identities = 178/178 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaaaagcttgtgtcggataaggcgcgggtgaataagaagaaccctccttgcctctac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atgaaaaagcttgtgtcggataaggcgcgggtgaataagaagaaccctccttgcctctac 511

                                                                       
Query: 61  cagtggcagtctggtaaaaaatctggctccaggactggccaaaagtctaagcctttggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 cagtggcagtctggtaaaaaatctggctccaggactggccaaaagtctaagcctttggat 571

                                                                     
Query: 121 gaaaatggcaagtttttacctacattaccatctgcatccaaggagttaaaggaaaagg 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaaaatggcaagtttttacctacattaccatctgcatccaaggagttaaaggaaaagg 629