Miyakogusa Predicted Gene
- Lj5g3v1131990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1131990.1 Non Chatacterized Hit- tr|J2SRN0|J2SRN0_9RHIZ
Putative TIM-barrel fold metal-dependent hydrolase
OS=,30.56,1.2,seg,NULL,CUFF.54839.1
(982 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81160 similar to UniRef100_A7A1L4 Cluster: Conserved ... 950 0.0
gnl|LJGI|TC62880 333 1e-90
gnl|LJGI|TC59801 62 7e-09
gnl|LJGI|TC71339 54 2e-06
>gnl|LJGI|TC81160 similar to UniRef100_A7A1L4 Cluster: Conserved protein; n=1;
Saccharomyces cerevisiae YJM789|Rep: Conserved protein -
Saccharomyces cerevisiae (strain YJM789) (Baker's
yeast), partial (7%)
Length = 499
Score = 950 bits (479), Expect = 0.0
Identities = 495/499 (99%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 316 ggcggctatccgtcatcatcatcgttgactggttctacggttcatcagttcgatctgcac 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcggctatccgtcatcatcatcgttgactggttctacggttcatcagttcgatctgcac 60
Query: 376 aggttcttcaatggagtcatcttcttctccgaccactgcaacatgaactccatcggagtc 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aggttcttcaatggagtcatcttcttctccgaccactgcaacatgaactccatcggagtc 120
Query: 436 atcgacttctccgattct-caacttcaccggagtcatctccttcttcggttgaagtctct 494
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcgacttctccgaggcggcaacttcaccggagtcatctccttcttcggttgaagtctct 180
Query: 495 tcccgatgtccataggagattccgatcgatcctttcgttgcttggctccttcagaaaggg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcccgatgtccataggagattccgatcgatcctttcgttgcttggctccttcagaaaggg 240
Query: 555 cttcttggattcttcttcattttcggcatcgtctcttctgcacacagattcatggtttgt 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttcttggattcttcttcattttcggcatcgtctcttctgcacacagattcatggtttgt 300
Query: 615 gcatcaaccctctgccattgttgttcagcctaagattgtctatgatcacactgtttcaca 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcatcaaccctctgccattgttgttcagcctaagattgtctatgatcacactgtttcaca 360
Query: 675 agttgtggaggtaacaattttcaagactgaatgttcatttttaatgattgaaattcatca 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agttgtggaggtaacaattttcaagactgaatgttcatttttaatgattgaaattcatca 420
Query: 735 atttatgaaactctggtttggattatggaatcattttcttgtttggccgattgttttgat 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atttatgaaactctggtttggattatggaatcattttcttgtttggccgattgttttgat 480
Query: 795 attggtgtttgatcctgga 813
|||||||||||||||||||
Sbjct: 481 attggtgtttgatcctgga 499
>gnl|LJGI|TC62880
Length = 791
Score = 333 bits (168), Expect = 1e-90
Identities = 174/176 (98%)
Strand = Plus / Plus
Query: 1 atggcggctcctgggattccgtcaccgttccggcaccatattcacaatcaaggttttcaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 615 atggcggctcctgggattccgttaccgttccggcaccatattcacaatcaaggttttcaa 674
Query: 61 tctttcagttctttgattgattcaagattgcctattgcaatcttttctcgatttcggttg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tctttcagttctttgattaattcaagattgcctattgcaatcttttctcgatttcggttg 734
Query: 121 gtttttgcgatttctgaatcgccaccttcgattatcgatcatcagcgttcaagtct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gtttttgcgatttctgaatcgccaccttcgattatcgatcatcagcgttcaagtct 790
>gnl|LJGI|TC59801
Length = 1003
Score = 61.9 bits (31), Expect = 7e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 802 tttgatcctggaggattttggctttgttcacaagatgtttgtgaaaa 848
|||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 736 tttgatcctggaggatttagggattgttcacaagctgtttgtgaaaa 782
>gnl|LJGI|TC71339
Length = 1171
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 802 tttgatcctggaggattttggctttgttcacaagatgtttgtgaaaa 848
|||||||||||||||||| || |||||||| || ||||||||||||
Sbjct: 70 tttgatcctggaggatttagggattgttcacgagctgtttgtgaaaa 116