Miyakogusa Predicted Gene

Lj5g3v1131840.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1131840.1 Non Chatacterized Hit- tr|Q4DA10|Q4DA10_TRYCC
Putative uncharacterized protein OS=Trypanosoma cruzi
,27.66,0.084,seg,NULL,CUFF.54836.1
         (660 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68245 similar to UniRef100_A7QMS0 Cluster: Chromosome...  1098   0.0  

>gnl|LJGI|TC68245 similar to UniRef100_A7QMS0 Cluster: Chromosome undetermined
           scaffold_127, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_127,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (42%)
          Length = 808

 Score = 1098 bits (554), Expect = 0.0
 Identities = 566/570 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaacatatgagaggttgccacttgatgatgatgatgagggacctagtggggccgcta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 atgcaacatatgagaggttgccacttgatgatgatgatgagggacctagtggggccgcta 259

                                                                       
Query: 61  cggcggcaagcggaggaggaagtggatcgtctcctccacctggaattggaattggcagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cggcggcaagcggaggaggaagtggatcgtctcctccacctggaattggaattggcagtg 319

                                                                       
Query: 121 gtgggggtcatcaactgcaggctggactggttccagatccatcatccatgccgttgtata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtgggggtcatcaactgcaggctggactggttccagatccatcatccatgccgttgtata 379

                                                                       
Query: 181 atctgccaccaaatctgttgtccaatggaggaggaggacaagtggggcatgatgctcttg 240
           |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 380 atctgccacccaatctgttgtcccatggaggaggaggacaagtggggcatgatgctcttg 439

                                                                       
Query: 241 cttgggctcatggaagaacaccttactgaattaattgacctcatgatcatgtggatgtgt 300
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 440 cttgggctcatggaagaacaccttcctgaattaattgacctcatgatcatgtggatgtgt 499

                                                                       
Query: 301 caagatttgagagaagaatatagaggtagagatctaatcaagtgttcagatctgtctatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caagatttgagagaagaatatagaggtagagatctaatcaagtgttcagatctgtctatc 559

                                                                       
Query: 361 ttgtatgatttggattattggtgttgcaaagttagaggcactgattttatagttgtgaag 420
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 560 ttgtatgatttggattattggtgttgccaagttagaggcactgattttatagttgtgaag 619

                                                                       
Query: 421 aactgtggagacaggaaccatgcttatttaattttatctatgtatatggattatgaactt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aactgtggagacaggaaccatgcttatttaattttatctatgtatatggattatgaactt 679

                                                                       
Query: 481 ctttttctcttttgtttctgtgttttgaataaaaaagatgatcatgggcatctttttaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctttttctcttttgtttctgtgttttgaataaaaaagatgatcatgggcatctttttaat 739

                                         
Query: 541 atatttatgaataatttagtagtttgtttc 570
           ||||||||||||||||||||||||||||||
Sbjct: 740 atatttatgaataatttagtagtttgtttc 769