Miyakogusa Predicted Gene
- Lj5g3v1118430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1118430.1 Non Chatacterized Hit- tr|I1L8G5|I1L8G5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41489
PE,83.29,0,SUBFAMILY NOT NAMED,NULL; TETRATRICOPEPTIDE REPEAT PROTEIN,
TPR,NULL; TPR,Tetratricopeptide repeat; ,CUFF.54786.1
(2145 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW595163 weakly similar to UniRef100_A7Q1P5 Cluster: Ch... 944 0.0
gnl|LJGI|TC71474 weakly similar to UniRef100_A7NXF5 Cluster: Chr... 704 0.0
gnl|LJGI|TC70683 similar to UniRef100_A7NXF5 Cluster: Chromosome... 620 e-177
gnl|LJGI|TC81130 weakly similar to UniRef100_A7NXF5 Cluster: Chr... 178 9e-44
gnl|LJGI|TC82526 similar to UniRef100_A7QW82 Cluster: Chromosome... 107 3e-22
gnl|LJGI|DC592875 UniRef100_Q8ITJ1 Cluster: Cellulose binding pr... 70 6e-11
gnl|LJGI|BW599404 similar to UniRef100_Q5TW25 Cluster: AGAP01120... 62 2e-08
gnl|LJGI|TC68942 62 2e-08
>gnl|LJGI|BW595163 weakly similar to UniRef100_A7Q1P5 Cluster: Chromosome chr7
scaffold_44, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_44, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 485
Score = 944 bits (476), Expect = 0.0
Identities = 482/484 (99%)
Strand = Plus / Plus
Query: 896 atttgacatctttagctaatcaattggaagaattgctccctgggactatcgataaaagag 955
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2 atttgagatctttagctaatcaattggaagaattgctccctgtgactatcgataaaagag 61
Query: 956 aaaggtaccatgctcttgctctctgttattatggagcaggtaaggacttggtagcactgg 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aaaggtaccatgctcttgctctctgttattatggagcaggtaaggacttggtagcactgg 121
Query: 1016 atcttctcagaaaattatcgagtaatagaaaggaaccaaaacatgttccaggtttgttat 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atcttctcagaaaattatcgagtaatagaaaggaaccaaaacatgttccaggtttgttat 181
Query: 1076 tggcttctaagatttgttctgagaatcccagtctagccgaagaaggagtaagatttgctc 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tggcttctaagatttgttctgagaatcccagtctagccgaagaaggagtaagatttgctc 241
Query: 1136 aaggagttcttgagagtttagatggcaggtgtaatcagttaaaaaatctcgttgaatttt 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaggagttcttgagagtttagatggcaggtgtaatcagttaaaaaatctcgttgaatttt 301
Query: 1196 ttcaaggtgtttcattgtcagcaacctcgaaattgcctgtttctgattctgagaggctta 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttcaaggtgtttcattgtcagcaacctcgaaattgcctgtttctgattctgagaggctta 361
Query: 1256 agagacaatctgaggcgcttcatgccttggaaaatgctgccagaacgagtaaaatgagag 1315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agagacaatctgaggcgcttcatgccttggaaaatgctgccagaacgagtaaaatgagag 421
Query: 1316 atccccttgtgctatatcatctcagtttagaatatgcagatcaaaggaagttggactcgg 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atccccttgtgctatatcatctcagtttagaatatgcagatcaaaggaagttggactcgg 481
Query: 1376 cact 1379
||||
Sbjct: 482 cact 485
>gnl|LJGI|TC71474 weakly similar to UniRef100_A7NXF5 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 609
Score = 704 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 1791 accatactcagcttctcgatgtcatgcatcaggtatgatgtatgaagcaaagggtcttta 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accatactcagcttctcgatgtcatgcatcaggtatgatgtatgaagcaaagggtcttta 60
Query: 1851 caaggaagctctgacagcttttcgcgaagctttggacattgatcccgatcatgtccccag 1910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaggaagctctgacagcttttcgcgaagctttggacattgatcccgatcatgtccccag 120
Query: 1911 cttaatctccactgctctagttctcaaacgatgcactaatccatcaaatccagcggtcag 1970
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttaatctccactgctctagttctcaaacgatgcactaatccatcaaatccagcggtcag 180
Query: 1971 gagctttctgatggacgcgctacggcacgacaggttgaatgcttctgcttggtataatct 2030
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagctttctgatggacgcgctacggcacgacaggttgaatgcttctgcttggtataatct 240
Query: 2031 tggccttcttcacaaggctgagggaacagcatcatcagtggttgaagctgcagagtgttt 2090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggccttcttcacaaggctgagggaacagcatcatcagtggttgaagctgcagagtgttt 300
Query: 2091 tcaggcagcatactctctcgaagaatcggcaccggttgaacctttcagatgagtg 2145
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcaggcagcatactctctcgaagaatcggcaccggttgaacctttcagatgagtg 355
>gnl|LJGI|TC70683 similar to UniRef100_A7NXF5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 589
Score = 620 bits (313), Expect = e-177
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 1 atgaagtggctacgcgcaggaggggaaacattgggaggagcagatgaagttttcccttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atgaagtggctacgcgcaggaggggaaacattgggaggagcagatgaagttttcccttca 336
Query: 61 tctgaatctattgtaaccaaggatttttccatcagtgggccatcgggccttgccggacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tctgaatctattgtaaccaaggatttttccatcagtgggccatcgggccttgccggacaa 396
Query: 121 gttgataagaagccggatacggggaatatagaagaagctgaatcatctttacgtgagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gttgataagaagccggatacggggaatatagaagaagctgaatcatctttacgtgagagt 456
Query: 181 ggcgtcttgaactatgaggaagctagagctctgctgggaagatatgaatatcagaaagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggcgtcttgaactatgaggaagctagagctctgctgggaagatatgaatatcagaaagga 516
Query: 241 aatttagtagccgccttgcatgtctttgagggaatagatataagtgccgtgactcctaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 aatttagtagccgccttgcatgtctttgagggaatagatataagtgccgtgactcctaag 576
Query: 301 atcaaacttgccc 313
|||||||||||||
Sbjct: 577 atcaaacttgccc 589
>gnl|LJGI|TC81130 weakly similar to UniRef100_A7NXF5 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (13%)
Length = 784
Score = 178 bits (90), Expect = 9e-44
Identities = 308/382 (80%), Gaps = 9/382 (2%)
Strand = Plus / Plus
Query: 1761 ggtgtgtctttcaaaatccaaggccatcaaaccatactcagcttctcgatgtcatgcatc 1820
|||||||||||||||||| |||||| ||| || |||| | |||||| ||||||||| |
Sbjct: 1 ggtgtgtctttcaaaatctaaggccttcagacaatacaccgcttctagatgtcatgtaat 60
Query: 1821 aggtatgatgtatgaagcaaagggtctttacaaggaagctctgacagcttttcgcgaagc 1880
||||| ||| | ||||||||||| || ||||| || ||| | | |||||||||||| ||
Sbjct: 61 aggtacaatgcacgaagcaaagggcctatacaaagaggctgtaaaagcttttcgcgatgc 120
Query: 1881 tttggacattgatcccgatcatgtccccagcttaatctccactgctctagttctcaaacg 1940
|||| ||||||||||| ||||| |||||||| || ||||||||| | | ||| | |||
Sbjct: 121 tttgaacattgatcccagacatgtacccagcttgatatccactgctgtggctcttagacg 180
Query: 1941 atgcactaatccatcaaatccagcggtcaggagctttctgatggacgcgctacggcacga 2000
|| | ||||| |||| |||| | ||||| |||||||||||||| || ||||| | ||
Sbjct: 181 gtggagtaatcaatcagatcctgttgtcagaagctttctgatggatgcactacgttatga 240
Query: 2001 caggttgaatgcttctgcttggtataatcttggccttcttcacaaggctgagggaacagc 2060
||| |||||||||||||||||||||||||| ||| |||||||||||||||| || |
Sbjct: 241 cagattgaatgcttctgcttggtataatctcggcattcttcacaaggctgaaggta---- 296
Query: 2061 atcatcagtggttgaagctgcagagtgttttcaggcagcatactctctcgaagaatcggc 2120
|||| | ||||||| ||| ||||||||||||||| | ||||| |||||| | ||
Sbjct: 297 -----gagtgctagaagctgtagaatgttttcaggcagcaaattctcttgaagaaacagc 351
Query: 2121 accggttgaacctttcagatga 2142
||| |||||||||||||||||
Sbjct: 352 accaattgaacctttcagatga 373
>gnl|LJGI|TC82526 similar to UniRef100_A7QW82 Cluster: Chromosome chr3 scaffold_199,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_199, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 938
Score = 107 bits (54), Expect = 3e-22
Identities = 93/106 (87%)
Strand = Plus / Plus
Query: 1003 ttggtagcactggatcttctcagaaaattatcgagtaatagaaaggaaccaaaacatgtt 1062
|||||||| ||||||||||||||||||| | ||||| | ||||||||||||||||| ||
Sbjct: 54 ttggtagctgtggatcttctcagaaaattgttgagtagtcgaaaggaaccaaaacatatt 113
Query: 1063 ccaggtttgttattggcttctaagatttgttctgagaatcccagtc 1108
|| ||| |||||||||||||| | ||||||| ||||||| ||||||
Sbjct: 114 cctggtctgttattggcttctgacatttgttgtgagaattccagtc 159
>gnl|LJGI|DC592875 UniRef100_Q8ITJ1 Cluster: Cellulose binding protein; n=1;
Heterodera glycines|Rep: Cellulose binding protein -
Heterodera glycines (Soybean cyst nematode worm),
partial (8%)
Length = 594
Score = 69.9 bits (35), Expect = 6e-11
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 799 cttttaatgattttgctaagaaaagtctctctcaatagaattgagtgggatccttcaatt 858
||||||||||||||| ||||||||||||||||||| | | ||||||||| ||||||||
Sbjct: 457 cttttaatgattttggtaagaaaagtctctctcaacataggcgagtgggattcttcaatt 516
Query: 859 ttggacc 865
|| ||||
Sbjct: 517 ttagacc 523
>gnl|LJGI|BW599404 similar to UniRef100_Q5TW25 Cluster: AGAP011205-PA; n=1; Anopheles
gambiae str. PEST|Rep: AGAP011205-PA - Anopheles gambiae
str., partial (1%)
Length = 472
Score = 61.9 bits (31), Expect = 2e-08
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 799 cttttaatgattttgctaagaaaagtctctctcaa 833
||||||||||||||| |||||||||||||||||||
Sbjct: 429 cttttaatgattttggtaagaaaagtctctctcaa 463
>gnl|LJGI|TC68942
Length = 1140
Score = 61.9 bits (31), Expect = 2e-08
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 799 cttttaatgattttgctaagaaaagtctctctcaa 833
||||||||||||||| |||||||||||||||||||
Sbjct: 463 cttttaatgattttggtaagaaaagtctctctcaa 497