Miyakogusa Predicted Gene

Lj5g3v1117260.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1117260.1 NODE_55171_length_848_cov_47.544811.path2.1
         (639 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60361 similar to UniRef100_A7Q1Q7 Cluster: Chromosome...  1225   0.0  
gnl|LJGI|TC81699 similar to UniRef100_UPI0000162818 Cluster: SNF...    96   3e-19

>gnl|LJGI|TC60361 similar to UniRef100_A7Q1Q7 Cluster: Chromosome chr7 scaffold_44,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_44, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 917

 Score = 1225 bits (618), Expect = 0.0
 Identities = 632/639 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaacctcttctctaagaaacccaccgccaaagaggctcttcgtgagagtaaacgggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 atgaacctcttctctaagaaacccaccgccaaagaggctcttcgtgagagtaaacgggaa 160

                                                                       
Query: 61  atggctaacgctaccagaggtatagagagggaaattggatcattacaattggaagnnnnn 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 161 atggctaacgctaccagaggtatagagagggaaattggatcattacaattggaagaaaaa 220

                                                                       
Query: 121 nngctagttgctgagataaagagaactgctaaaacaggaaatgaggcagcgactaaaact 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aagctagttgctgagataaagagaactgctaaaacaggaaatgaggcagcgactaaaact 280

                                                                       
Query: 181 ctagcccgccagcttgtcaggcttaggcagcagattgctaatcttcaaggtagtcgagct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctagcccgccagcttgtcaggcttaggcagcagattgctaatcttcaaggtagtcgagct 340

                                                                       
Query: 241 cagatgagaggcattgcgactcacacgcaggcaatgcatgcccattcttctgttgctgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cagatgagaggcattgcgactcacacgcaggcaatgcatgcccattcttctgttgctgtt 400

                                                                       
Query: 301 ggtatgaaaggcgctagtaaggcaatggcagcaatgaataagcaaatggatccggcaaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ggtatgaaaggcgctagtaaggcaatggcagcaatgaataagcaaatggatccggcaaag 460

                                                                       
Query: 361 caagccaaagttatgctggaattccagaaacaatcaacgcagatggatatgactactgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 caagccaaagttatgctggaattccagaaacaatcaacgcagatggatatgactactgaa 520

                                                                       
Query: 421 atgatgtcagatgccatagatgatgcaatagacaatgatgaagctgaagaggagactgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 atgatgtcagatgccatagatgatgcaatagacaatgatgaagctgaagaggagactgat 580

                                                                       
Query: 481 gagctgacaaaccaggttcttgatgaaattggtgtggatgttgcctcacagttatcaaca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gagctgacaaaccaggttcttgatgaaattggtgtggatgttgcctcacagttatcaaca 640

                                                                       
Query: 541 gctcccaaagggagagtttcaacaaagaatactgaaaacgtcagcagctctggcattgat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gctcccaaagggagagtttcaacaaagaatactgaaaacgtcagcagctctggcattgat 700

                                                  
Query: 601 gaccttgagaagcgtttggcggctcttagaaacccataa 639
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gaccttgagaagcgtttggcggctcttagaaacccataa 739


>gnl|LJGI|TC81699 similar to UniRef100_UPI0000162818 Cluster: SNF7 family protein;
           n=1; Arabidopsis thaliana|Rep: SNF7 family protein -
           Arabidopsis thaliana, partial (91%)
          Length = 968

 Score = 95.6 bits (48), Expect = 3e-19
 Identities = 189/236 (80%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggtatgaaaggcgctagtaaggcaatggcagcaatgaataagcaaatggatccggcaaag 360
           |||||||| || || | ||| |||||||  |||||||||||||||||||  || ||||||
Sbjct: 383 ggtatgaagggtgccactaaagcaatggtggcaatgaataagcaaatggcaccagcaaag 442

                                                                       
Query: 361 caagccaaagttatgctggaattccagaaacaatcaacgcagatggatatgactactgaa 420
           || || || || || |  |||||||| || || ||| | || ||||| ||||| | ||| 
Sbjct: 443 caggcgaaggtgatccaagaattccaaaagcagtcagcacaaatggacatgacgattgag 502

                                                                       
Query: 421 atgatgtcagatgccatagatgatgcaatagacaatgatgaagctgaagaggagactgat 480
           |||||||||||  ||||||||||  |  ||||||| ||||||||||| || || || || 
Sbjct: 503 atgatgtcagaatccatagatgaaactttagacaaagatgaagctgaggaagaaacagaa 562

                                                                   
Query: 481 gagctgacaaaccaggttcttgatgaaattggtgtggatgttgcctcacagttatc 536
           ||||| || |||||||||||||| || ||||| |||||| |||| || ||||||||
Sbjct: 563 gagctcactaaccaggttcttgacgagattggagtggatattgcatcccagttatc 618