Miyakogusa Predicted Gene
- Lj5g3v1096020.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1096020.1 tr|A8XKX1|A8XKX1_CAEBR Protein CBR-OSTD-1
OS=Caenorhabditis briggsae GN=ostd-1 PE=4 SV=2,39.47,9e-19,seg,NULL;
Ribophorin_II,Ribophorin II; SUBFAMILY NOT NAMED,NULL; RIBOPHORIN
II,Ribophorin II,CUFF.54770.1
(468 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59793 similar to UniRef100_A7Q1R4 Cluster: Chromosome... 904 0.0
gnl|LJGI|FS345609 54 8e-07
>gnl|LJGI|TC59793 similar to UniRef100_A7Q1R4 Cluster: Chromosome chr7 scaffold_44,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_44, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (52%)
Length = 1424
Score = 904 bits (456), Expect = 0.0
Identities = 465/468 (99%)
Strand = Plus / Plus
Query: 1 atggagaactctttcttacggctaattgggcatgttgaattggattttccagaagcacct 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 638 atggagaactctttcttacggctacttgggcatgttgaattggattttccagaagcacct 697
Query: 61 gagaaagcagcacgtcctcccacaccacccgttgatccttactcaagatatgggcctaaa 120
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 698 gagaaagcagcacgtcctcctacaccacctgttgatccttactcaagatatgggcctaaa 757
Query: 121 gctgagattaaccacatcttcagggttcctgaaaagcgaccagcccaagaactctctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gctgagattaaccacatcttcagggttcctgaaaagcgaccagcccaagaactctctctt 817
Query: 181 gctttcttggggttgatccttttgccattcattggctttttggttgggctattacgtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gctttcttggggttgatccttttgccattcattggctttttggttgggctattacgtttg 877
Query: 241 ggggtgaacctaaagaatttccccagttcaacagtacctgctacatttgccatcctattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 ggggtgaacctaaagaatttccccagttcaacagtacctgctacatttgccatcctattc 937
Query: 301 catggcggtattgctgcagttctgttgctttatgtacttttctggttaaagctggacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 catggcggtattgctgcagttctgttgctttatgtacttttctggttaaagctggacctg 997
Query: 361 ttcactacactcaaagccctcggttttttgggagctttcttgttgtttgtcggacacagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 ttcactacactcaaagccctcggttttttgggagctttcttgttgtttgtcggacacagg 1057
Query: 421 attctttcccatcttgctcatacatcagccaagttaaagtctgcatga 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 attctttcccatcttgctcatacatcagccaagttaaagtctgcatga 1105
>gnl|LJGI|FS345609
Length = 221
Score = 54.0 bits (27), Expect = 8e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 438 tcatacatcagccaagttaaagtctgcatga 468
||||||||||||||||||||||| |||||||
Sbjct: 218 tcatacatcagccaagttaaagtttgcatga 188