Miyakogusa Predicted Gene
- Lj5g3v1051350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1051350.1 CUFF.54745.1
(331 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW599654 similar to UniRef100_A7NX52 Cluster: Chromosom... 214 3e-55
gnl|LJGI|BW599775 similar to UniRef100_A7NX52 Cluster: Chromosom... 214 3e-55
gnl|LJGI|TC63408 similar to UniRef100_A7NX52 Cluster: Chromosome... 214 3e-55
>gnl|LJGI|BW599654 similar to UniRef100_A7NX52 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (64%)
Length = 459
Score = 214 bits (108), Expect = 3e-55
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 191 ccacacaccattttcacgacgccctagatttcctccgaggatggccttcatctctttcct 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 ccacacaccattttcacgacgccctagatttcctccgaggatggccttcatctctttcct 173
Query: 251 cggcagagtcctcttcgcttccgttttcatcctctctgcataccaaga 298
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 cggcagagtcctcttcgcttccgttttcatcctctctgcataccaaga 221
Score = 83.8 bits (42), Expect = 6e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 89 taccctttctctctcaacaaaacaaacaatctcctataatttcaaatctctctctcattt 148
||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 12 taccctttctctctcaacaaagcggggggtctcctataatttcaaatctctctctcattt 71
Query: 149 ccactctgtcctcc 162
|||||| |||||||
Sbjct: 72 ccactcagtcctcc 85
>gnl|LJGI|BW599775 similar to UniRef100_A7NX52 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 486
Score = 214 bits (108), Expect = 3e-55
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 191 ccacacaccattttcacgacgccctagatttcctccgaggatggccttcatctctttcct 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ccacacaccattttcacgacgccctagatttcctccgaggatggccttcatctctttcct 177
Query: 251 cggcagagtcctcttcgcttccgttttcatcctctctgcataccaaga 298
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 cggcagagtcctcttcgcttccgttttcatcctctctgcataccaaga 225
Score = 143 bits (72), Expect = 8e-34
Identities = 81/84 (96%)
Strand = Plus / Plus
Query: 79 ttgacgaaactaccctttctctctcaacaaaacaaacaatctcctataatttcaaatctc 138
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 6 ttgacgaaactaccctttctctctcggcaaaacaaacaatctcctataatttcgaatctc 65
Query: 139 tctctcatttccactctgtcctcc 162
||||||||||||||||||||||||
Sbjct: 66 tctctcatttccactctgtcctcc 89
>gnl|LJGI|TC63408 similar to UniRef100_A7NX52 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 979
Score = 214 bits (108), Expect = 3e-55
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 191 ccacacaccattttcacgacgccctagatttcctccgaggatggccttcatctctttcct 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 ccacacaccattttcacgacgccctagatttcctccgaggatggccttcatctctttcct 96
Query: 251 cggcagagtcctcttcgcttccgttttcatcctctctgcataccaaga 298
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 cggcagagtcctcttcgcttccgttttcatcctctctgcataccaaga 144