Miyakogusa Predicted Gene

Lj5g3v1049250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1049250.1 tr|D7LIS0|D7LIS0_ARALL Lipase class 3 family
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRA,57.14,1e-17,CGI-141 RELATED,NULL; CGI-141-RELATED/LIPASE
CONTAINING PROTEIN,NULL,99985_g.1
         (253 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV778459 weakly similar to UniRef100_A7QVS2 Cluster: Ch...   446   e-125

>gnl|LJGI|AV778459 weakly similar to UniRef100_A7QVS2 Cluster: Chromosome chr7
           scaffold_192, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr7 scaffold_192, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 560

 Score =  446 bits (225), Expect = e-125
 Identities = 246/253 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaaaattgagggaactaaacctgcagtatctgaggagttatatatacccgggactgtt 60
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atgaaaattgagggaactgaacctgcagtatctgaggagttatatatacccgggactgtt 434

                                                                       
Query: 61  tattatctgaagaggaactcaggatcccaaaataacgttggaaaagattttttcaccctt 120
           |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||
Sbjct: 433 tattatctgaagaggaactcaggatcccgaaatcacgttggcaaagattttttcaccctt 374

                                                                       
Query: 121 ttgaagatgcaatctggagagcatttcccaaggatcatcctttcaggaaattttatcaca 180
            || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctgcagatgcaatctggagagcatttcccaaggatcatcctttcaggaaattttatcaca 314

                                                                       
Query: 181 gaccacagatgtgatagccataattatgctttgagagatgttcttaaaggtttgccttgg 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaccccagatgtgatagccataattatgctttgagagatgttcttaaaggtttgccttgg 254

                        
Query: 241 tacggcgaggaag 253
           |||||||||||||
Sbjct: 253 tacggcgaggaag 241