Miyakogusa Predicted Gene
- Lj5g3v1027080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1027080.1 tr|G7IG88|G7IG88_MEDTR Poly(RC)-binding protein
OS=Medicago truncatula GN=MTR_2g038020 PE=4
SV=1,59.72,0.000000000000007,Eukaryotic type KH-domain (KH-domain type
I),NULL; KH DOMAIN-CONTAINING PROTEIN,NULL; KH DOMAIN
CONT,CUFF.54707.1
(1656 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58201 similar to UniRef100_A7QMQ0 Cluster: Chromosome... 1382 0.0
gnl|LJGI|TC78117 similar to UniRef100_A7PUN7 Cluster: Chromosome... 1183 0.0
gnl|LJGI|AV770845 similar to UniRef100_A7QMQ0 Cluster: Chromosom... 131 2e-29
gnl|LJGI|TC59955 similar to UniRef100_A7QMQ0 Cluster: Chromosome... 64 3e-09
gnl|LJGI|TC70700 similar to UniRef100_Q58T16 Cluster: FLK; n=1; ... 56 7e-07
>gnl|LJGI|TC58201 similar to UniRef100_A7QMQ0 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (20%)
Length = 828
Score = 1382 bits (697), Expect = 0.0
Identities = 697/697 (100%)
Strand = Plus / Plus
Query: 1 atgtctggggaacaatttgatggacaagatgcaggctatgtgcctgagaatcctgatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atgtctggggaacaatttgatggacaagatgcaggctatgtgcctgagaatcctgatgat 191
Query: 61 tttccgcaaaacaattccgatgaaattgaaggagggaatgtgattgatgacgactctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tttccgcaaaacaattccgatgaaattgaaggagggaatgtgattgatgacgactctggg 251
Query: 121 tttcctcaactacagcctgatgatgtgcaggaggatgtggatgtgggagtgggagatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tttcctcaactacagcctgatgatgtgcaggaggatgtggatgtgggagtgggagatttg 311
Query: 181 gctgaggatgccaatcctcctgaaggtgaatttgatggtggtcatgatgttgttgaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gctgaggatgccaatcctcctgaaggtgaatttgatggtggtcatgatgttgttgaagat 371
Query: 241 ttgcctggaaacgatgttgatgattctcttccgccggagcttactgaggaacaagaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttgcctggaaacgatgttgatgattctcttccgccggagcttactgaggaacaagaacaa 431
Query: 301 catgatggagtcattactgaggaacaagaacaacatgatggaggaggcgtgactgaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 catgatggagtcattactgaggaacaagaacaacatgatggaggaggcgtgactgaggag 491
Query: 361 aattttggctccccagaaaaacaggtacccggggaagatttgaaagggagtgaaataaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aattttggctccccagaaaaacaggtacccggggaagatttgaaagggagtgaaataaag 551
Query: 421 aagtggccggggtggcctggagagaatgttttcaggatgttggttcctgcgcaaaaggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aagtggccggggtggcctggagagaatgttttcaggatgttggttcctgcgcaaaaggtt 611
Query: 481 ggcagtattattggccgtaagggcgagtttattaagaaaattactgaagagactaaggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ggcagtattattggccgtaagggcgagtttattaagaaaattactgaagagactaaggct 671
Query: 541 cgtattaagattctcgatggtccacctggaactgcagaaagagcagtaatggtttctgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 cgtattaagattctcgatggtccacctggaactgcagaaagagcagtaatggtttctgca 731
Query: 601 aaagaagaaccagagcgcagcataccacctgctgtggagggcttgttaagggttcataaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aaagaagaaccagagcgcagcataccacctgctgtggagggcttgttaagggttcataaa 791
Query: 661 cacgttgtcaatgtggaccaacctgctgatagtgcat 697
|||||||||||||||||||||||||||||||||||||
Sbjct: 792 cacgttgtcaatgtggaccaacctgctgatagtgcat 828
>gnl|LJGI|TC78117 similar to UniRef100_A7PUN7 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 670
Score = 1183 bits (597), Expect = 0.0
Identities = 597/597 (100%)
Strand = Plus / Plus
Query: 1060 ccaggtcctggaagtggtggtggacctgcttttccacctaatcctcaatatatgccgcca 1119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ccaggtcctggaagtggtggtggacctgcttttccacctaatcctcaatatatgccgcca 61
Query: 1120 ccttcacataactatgataattactacccacctgctgacctgcctcccatggacaagcac 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ccttcacataactatgataattactacccacctgctgacctgcctcccatggacaagcac 121
Query: 1180 cttcatcagggtccaccacctgcctatgcaagggatgctcctatgggaattcatccatcc 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cttcatcagggtccaccacctgcctatgcaagggatgctcctatgggaattcatccatcc 181
Query: 1240 agtgcacctccgcaacaatctggtgtgactaaggtcacacatcatatgcaaattcccctg 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agtgcacctccgcaacaatctggtgtgactaaggtcacacatcatatgcaaattcccctg 241
Query: 1300 tcatacgcagatgctgttattggagcatcaggagcaaatattagctacattcgacgtgct 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tcatacgcagatgctgttattggagcatcaggagcaaatattagctacattcgacgtgct 301
Query: 1360 agtggagcaagtattacaattcaagaaaccaggggtgtgccaggggagatgaccgtagag 1419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agtggagcaagtattacaattcaagaaaccaggggtgtgccaggggagatgaccgtagag 361
Query: 1420 ataagtggtactgcttctcaaattcaagcagcccaacagctggtccagaatttcatggct 1479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ataagtggtactgcttctcaaattcaagcagcccaacagctggtccagaatttcatggct 421
Query: 1480 gaagcagcatctgcgcaacaggatcaaatgagtggacaaattaatcaaggttataattcc 1539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaagcagcatctgcgcaacaggatcaaatgagtggacaaattaatcaaggttataattcc 481
Query: 1540 tatcctactaatgcccctgtatatgcatctccgccacaaagcgctggtggtcatgcaggc 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tatcctactaatgcccctgtatatgcatctccgccacaaagcgctggtggtcatgcaggc 541
Query: 1600 catgcgcctcctgcagattatggtcctgtatatggcaccaattatggttattgaaca 1656
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 catgcgcctcctgcagattatggtcctgtatatggcaccaattatggttattgaaca 598
>gnl|LJGI|AV770845 similar to UniRef100_A7QMQ0 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(14%)
Length = 472
Score = 131 bits (66), Expect = 2e-29
Identities = 162/194 (83%)
Strand = Plus / Minus
Query: 1313 ctgttattggagcatcaggagcaaatattagctacattcgacgtgctagtggagcaagta 1372
|||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| ||||
Sbjct: 465 ctgttattggagcatcaggaacaaatatcagctacattcgtcgtgctagtggagccagta 406
Query: 1373 ttacaattcaagaaaccaggggtgtgccaggggagatgaccgtagagataagtggtactg 1432
|||| ||||| || || | |||||||||||||||| ||| | ||||||| ||| |||
Sbjct: 405 ttactattcaggagacaaatggtgtgccaggggagaggactatcgagataaatgggactt 346
Query: 1433 cttctcaaattcaagcagcccaacagctggtccagaatttcatggctgaagcagcatctg 1492
|||| | ||| || ||||||| || |||||| ||||||| | | |||||||| ||| ||
Sbjct: 345 cttcactaatacaggcagccccaccgctggttcagaattccgttgctgaagctgcaagtg 286
Query: 1493 cgcaacaggatcaa 1506
|| ||||||||||
Sbjct: 285 cgacacaggatcaa 272
>gnl|LJGI|TC59955 similar to UniRef100_A7QMQ0 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (55%)
Length = 1045
Score = 63.9 bits (32), Expect = 3e-09
Identities = 140/176 (79%)
Strand = Plus / Plus
Query: 418 aagaagtggccggggtggcctggagagaatgttttcaggatgttggttcctgcgcaaaag 477
||||| |||||||||||||| || |||| ||| ||| | ||| | ||||| ||||| |||
Sbjct: 307 aagaaatggccggggtggcccggggagagtgtgttccgaatgctagttccggcgcacaag 366
Query: 478 gttggcagtattattggccgtaagggcgagtttattaagaaaattactgaagagactaag 537
||||| |||| ||||| || || || || ||||||||||||||| || |||||
Sbjct: 367 gttgggggtataattggacgcaaaggagaatttattaagaaaattgtggaggagacgcga 426
Query: 538 gctcgtattaagattctcgatggtccacctggaactgcagaaagagcagtaatggt 593
||||| |||| ||||| |||||||| || |||||| ||||||| || ||||||||
Sbjct: 427 gctcgcgttaaaattcttgatggtcctccgggaactccagaaagggctgtaatggt 482
>gnl|LJGI|TC70700 similar to UniRef100_Q58T16 Cluster: FLK; n=1; Arabidopsis
thaliana|Rep: FLK - Arabidopsis thaliana (Mouse-ear
cress), partial (14%)
Length = 587
Score = 56.0 bits (28), Expect = 7e-07
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 1381 caagaaaccaggggtgtgccaggggagatgaccgtagagataagtggtactgcttctcaa 1440
|||||||| || ||||| || ||||||||||| || || || ||||| |||||| |||||
Sbjct: 31 caagaaacaagaggtgttcctggggagatgacagttgaaatcagtggaactgctgctcaa 90
Query: 1441 attcaagcagcccaacagctggtccagaatttcatggctgaagc 1484
| ||| |||| || || ||| | |||||||| |||||||||||
Sbjct: 91 gtccaaacagcgcagcaactgatacagaattttatggctgaagc 134