Miyakogusa Predicted Gene
- Lj5g3v1015870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1015870.1 Non Chatacterized Hit- tr|I3SNQ1|I3SNQ1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.34,0,Ribosomal_S19,Ribosomal protein S19/S15; no
description,Ribosomal protein S19, superfamily; rpsS_arc,CUFF.54710.1
(456 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63172 homologue to UniRef100_A7NX09 Cluster: Chromoso... 904 0.0
gnl|LJGI|TC72149 homologue to UniRef100_A7NX09 Cluster: Chromoso... 896 0.0
gnl|LJGI|TC63240 homologue to UniRef100_A7NX09 Cluster: Chromoso... 295 1e-79
gnl|LJGI|BW599935 homologue to UniRef100_Q8W538 Cluster: Ribosom... 198 2e-50
gnl|LJGI|AU251990 similar to UniRef100_A7NX09 Cluster: Chromosom... 90 1e-17
gnl|LJGI|TC80933 similar to UniRef100_Q2V999 Cluster: 40S riboso... 52 3e-06
>gnl|LJGI|TC63172 homologue to UniRef100_A7NX09 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; core
eudicotyledons|Rep: Chromosome chr5 scaffold_2, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (81%)
Length = 701
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 1 atggcggatgtggaaaccgatgttgctgcaggagttccgaagaagaggacgttcaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggcggatgtggaaaccgatgttgctgcaggagttccgaagaagaggacgttcaagaag 122
Query: 61 ttcagtttccgtggtgttgatctcgatgctctcttggatatgtccactgatgagcttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttcagtttccgtggtgttgatctcgatgctctcttggatatgtccactgatgagcttgtt 182
Query: 121 aagcttttctctgctcgtgctcgcagaaggtttcagcgcggtttgactcgcaagcctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aagcttttctctgctcgtgctcgcagaaggtttcagcgcggtttgactcgcaagcctatg 242
Query: 181 gctctgatcaagaagctgcgcaaggcgaaacgggaggctccacaaggtgagaagccagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gctctgatcaagaagctgcgcaaggcgaaacgggaggctccacaaggtgagaagccagag 302
Query: 241 ccggtaaggactcacctccgtaacatgatcattgtgcctgagatgattggtagcattatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccggtaaggactcacctccgtaacatgatcattgtgcctgagatgattggtagcattatt 362
Query: 301 ggtgtttacaatgggaagaccttcaatcaagttgaaatcaagccagaaatgattggccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ggtgtttacaatgggaagaccttcaatcaagttgaaatcaagccagaaatgattggccac 422
Query: 361 tatctagctgagttctcaatctcttacaagcctgttaagcatggaaggcctggtattggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tatctagctgagttctcaatctcttacaagcctgttaagcatggaaggcctggtattggt 482
Query: 421 gctactcactcttccaggttcattcctctcaagtga 456
||||||||||||||||||||||||||||||||||||
Sbjct: 483 gctactcactcttccaggttcattcctctcaagtga 518
>gnl|LJGI|TC72149 homologue to UniRef100_A7NX09 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; core
eudicotyledons|Rep: Chromosome chr5 scaffold_2, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (81%)
Length = 787
Score = 896 bits (452), Expect = 0.0
Identities = 455/456 (99%)
Strand = Plus / Plus
Query: 1 atggcggatgtggaaaccgatgttgctgcaggagttccgaagaagaggacgttcaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atggcggatgtggaaaccgatgttgctgcaggagttccgaagaagaggacgttcaagaag 204
Query: 61 ttcagtttccgtggtgttgatctcgatgctctcttggatatgtccactgatgagcttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttcagtttccgtggtgttgatctcgatgctctcttggatatgtccactgatgagcttgtt 264
Query: 121 aagcttttctctgctcgtgctcgcagaaggtttcagcgcggtttgactcgcaagcctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagcttttctctgctcgtgctcgcagaaggtttcagcgcggtttgactcgcaagcctatg 324
Query: 181 gctctgatcaagaagctgcgcaaggcgaaacgggaggctccacaaggtgagaagccagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctctgatcaagaagctgcgcaaggcgaaacgggaggctccacaaggtgagaagccagag 384
Query: 241 ccggtaaggactcacctccgtaacatgatcattgtgcctgagatgattggtagcattatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccggtaaggactcacctccgtaacatgatcattgtgcctgagatgattggtagcattatt 444
Query: 301 ggtgtttacaatgggaagaccttcaatcaagttgaaatcaagccagaaatgattggccac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtgtttacaatgggaagaccttcaatcaagttgaaatcaagccagaaatgattggccac 504
Query: 361 tatctagctgagttctcaatctcttacaagcctgttaagcatggaaggcctggtattggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatctagctgagttctcaatctcttacaagcctgttaagcatggaaggcctggtattggt 564
Query: 421 gctactcactcttccaggttcattcctctcaagtga 456
||||| ||||||||||||||||||||||||||||||
Sbjct: 565 gctacccactcttccaggttcattcctctcaagtga 600
>gnl|LJGI|TC63240 homologue to UniRef100_A7NX09 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; core
eudicotyledons|Rep: Chromosome chr5 scaffold_2, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (80%)
Length = 704
Score = 295 bits (149), Expect = 1e-79
Identities = 350/417 (83%)
Strand = Plus / Plus
Query: 40 aagaagaggacgttcaagaagttcagtttccgtggtgttgatctcgatgctctcttggat 99
|||||||| ||||||||||||||||| ||| | ||||| ||| | ||||| || | ||
Sbjct: 79 aagaagagaacgttcaagaagttcagcttcaggggtgtcgatttggatgcgcttctcgac 138
Query: 100 atgtccactgatgagcttgttaagcttttctctgctcgtgctcgcagaaggtttcagcgc 159
|||||||||||||||||||| ||||| ||| ||| ||||||||||||||||| ||| |
Sbjct: 139 atgtccactgatgagcttgtcaagctcttcagtgcccgtgctcgcagaaggttccagaga 198
Query: 160 ggtttgactcgcaagcctatggctctgatcaagaagctgcgcaaggcgaaacgggaggct 219
||| | || | ||||| ||||| |||| |||||||| ||||| |||||| |||||||
Sbjct: 199 ggtctcaccaggaagcccatggccttgattaagaagcttcgcaaagcgaaaagggaggca 258
Query: 220 ccacaaggtgagaagccagagccggtaaggactcacctccgtaacatgatcattgtgcct 279
||| |||||||||||||| || || | || |||||| | |||||||| ||||||||
Sbjct: 259 ccagctggtgagaagccagaaccagtgcgcacccacctcaggaacatgattattgtgcca 318
Query: 280 gagatgattggtagcattattggtgtttacaatgggaagaccttcaatcaagttgaaatc 339
||||||||||| |||||||| || || |||||||| ||||| ||||| || ||||| |||
Sbjct: 319 gagatgattggcagcattatcggggtgtacaatggaaagactttcaaccaggttgagatc 378
Query: 340 aagccagaaatgattggccactatctagctgagttctcaatctcttacaagcctgttaag 399
|| || || ||||||||||| || || ||||||||||| || || |||||||||||||||
Sbjct: 379 aaacctgagatgattggccattaccttgctgagttctctatttcatacaagcctgttaag 438
Query: 400 catggaaggcctggtattggtgctactcactcttccaggttcattcctctcaagtga 456
|| || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 439 cacggtaggcctggtattggtgctactcactcttccaggtttattcctctcaagtga 495
>gnl|LJGI|BW599935 homologue to UniRef100_Q8W538 Cluster: Ribosomal S15 protein; n=1;
Retama raetam|Rep: Ribosomal S15 protein - Retama
raetam, partial (78%)
Length = 583
Score = 198 bits (100), Expect = 2e-50
Identities = 242/287 (84%), Gaps = 2/287 (0%)
Strand = Plus / Plus
Query: 172 aagcctatggctctgatcaagaagctgcgcaaggcgaaacgggaggctccacaaggtgag 231
||||| ||||| |||| |||||||| ||||| |||||| ||||||| ||| ||||||
Sbjct: 250 aagcccatggccttgattaagaagcttcgcaaagcgaaaagggaggcaccagctggtgag 309
Query: 232 aagccagagccggtaaggactcacctccgtaacatgatcattgtgcctgagatgattggt 291
|||||||| || || | || |||||| |||||||| |||||||| |||||||||||
Sbjct: 310 aagccagaaccagtgcgcacccacctcaagaacatgattattgtgccagagatgattggc 369
Query: 292 agcattattgg-tgtttacaatgggaa-gaccttcaatcaagttgaaatcaagccagaaa 349
|||||||| || || |||||||| || ||| ||||| || ||||| ||||| || || |
Sbjct: 370 agcattatcgggngtgtacaatggtaaagactttcaaccatgttgagatcaaacctgaga 429
Query: 350 tgattggccactatctagctgagttctcaatctcttacaagcctgttaagcatggaaggc 409
|||||||||| || || ||||||||||| || || ||||||||||||||||| || ||||
Sbjct: 430 tgattggccattaccttgctgagttctctatttcatacaagcctgttaagcacggtaggc 489
Query: 410 ctggtattggtgctactcactcttccaggttcattcctctcaagtga 456
||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 490 ctggtattggtgctactcactcttccaggtttattcctctcaagtga 536
>gnl|LJGI|AU251990 similar to UniRef100_A7NX09 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=2; core
eudicotyledons|Rep: Chromosome chr5 scaffold_2, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 249
Score = 89.7 bits (45), Expect = 1e-17
Identities = 96/113 (84%)
Strand = Plus / Plus
Query: 40 aagaagaggacgttcaagaagttcagtttccgtggtgttgatctcgatgctctcttggat 99
|||||||| ||||||||||||||||| ||| | ||||| ||| | ||||| || | ||
Sbjct: 113 aagaagagaacgttcaagaagttcagcttcaggggtgtcgatttggatgcgcttctcgac 172
Query: 100 atgtccactgatgagcttgttaagcttttctctgctcgtgctcgcagaaggtt 152
|||||||||||||||||||| ||||| ||| ||| |||||||||||||||||
Sbjct: 173 atgtccactgatgagcttgtcaagctcttcagtgcccgtgctcgcagaaggtt 225
>gnl|LJGI|TC80933 similar to UniRef100_Q2V999 Cluster: 40S ribosomal protein
S15-like; n=1; Solanum tuberosum|Rep: 40S ribosomal
protein S15-like - Solanum tuberosum (Potato), partial
(98%)
Length = 597
Score = 52.0 bits (26), Expect = 3e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 385 tacaagcctgttaagcatggaaggcctggtattggtgctactcactcttccaggttcatt 444
||||||||||| |||| || ||||| ||||||||||| || ||||||||| | |||||
Sbjct: 440 tacaagcctgtgcagcacggcaggcccggtattggtgccacccactcttcccgcttcatc 499
Query: 445 cctctcaagt 454
|| |||||||
Sbjct: 500 cccctcaagt 509