Miyakogusa Predicted Gene

Lj5g3v1014550.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1014550.1 Non Chatacterized Hit- tr|B6T4D5|B6T4D5_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,58.02,5e-19,Ribosomal_S21,Ribosomal protein S21,CUFF.54611.1
         (342 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69756 similar to UniRef100_A7R1D4 Cluster: Chromosome...   646   0.0  
gnl|LJGI|TC63415 similar to UniRef100_A7R1D4 Cluster: Chromosome...   646   0.0  

>gnl|LJGI|TC69756 similar to UniRef100_A7R1D4 Cluster: Chromosome undetermined
           scaffold_346, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_346,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (76%)
          Length = 593

 Score =  646 bits (326), Expect = 0.0
 Identities = 338/342 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaactcaattgctaagcgtttatcaagcttatttgggaagtcagcttgcgccactgaa 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 atgaactcaattgctaggcgtttatcaagcttatttgggaagtcagcttgcgccactgaa 229

                                                                       
Query: 61  cccttgaatagtgggcgtcatcaactgcagcaacttcagcaatgcagaggcatacgagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 cccttgaatagtgggcgtcatcaactgcagcaacttcagcaatgcagaggcatacgagtg 289

                                                                       
Query: 121 cgggtctttaatgggaacttggaatcggcattggcattgatgcagcgtaagatgacatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cgggtctttaatgggaacttggaatcggcattggcattgatgcagcgtaagatgacatca 349

                                                                       
Query: 181 agtgggatcgagagaatgataaagaaagaacagagattccatatcaaaaactctgaaaag 240
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agtgggatcgagaggatgataaagaaagaacagagattccatatcaaaaactctgaaaag 409

                                                                       
Query: 241 cgtgttttagcccgaaagaacttggagcggagacttcgatctgaggaccttgcccggaaa 300
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 410 cgtgttttagcccgaaagaacttggagcggaggcttcgatccgaggaccttgcccggaaa 469

                                                     
Query: 301 cttaaggctattatgatcaagaaagtcaggggtctttgagaa 342
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cttaaggctattatgatcaagaaagtcaggggtctttgagaa 511


>gnl|LJGI|TC63415 similar to UniRef100_A7R1D4 Cluster: Chromosome undetermined
           scaffold_346, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_346,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (76%)
          Length = 698

 Score =  646 bits (326), Expect = 0.0
 Identities = 338/342 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaactcaattgctaagcgtttatcaagcttatttgggaagtcagcttgcgccactgaa 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39  atgaactcaattgctaggcgtttatcaagcttatttgggaagtcagcttgcgccactgaa 98

                                                                       
Query: 61  cccttgaatagtgggcgtcatcaactgcagcaacttcagcaatgcagaggcatacgagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99  cccttgaatagtgggcgtcatcaactgcagcaacttcagcaatgcagaggcatacgagtg 158

                                                                       
Query: 121 cgggtctttaatgggaacttggaatcggcattggcattgatgcagcgtaagatgacatca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 cgggtctttaatgggaacttggaatcggcattggcattgatgcagcgtaagatgacatca 218

                                                                       
Query: 181 agtgggatcgagagaatgataaagaaagaacagagattccatatcaaaaactctgaaaag 240
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 agtgggatcgagaggatgataaagaaagaacagagattccatatcaaaaactctgaaaag 278

                                                                       
Query: 241 cgtgttttagcccgaaagaacttggagcggagacttcgatctgaggaccttgcccggaaa 300
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 279 cgtgttttagcccgaaagaacttggagcggaggcttcgatccgaggaccttgcccggaaa 338

                                                     
Query: 301 cttaaggctattatgatcaagaaagtcaggggtctttgagaa 342
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cttaaggctattatgatcaagaaagtcaggggtctttgagaa 380