Miyakogusa Predicted Gene
- Lj5g3v1003610.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v1003610.1 Non Chatacterized Hit- tr|O23510|O23510_ARATH
Putative uncharacterized protein AT4g16670
OS=Arabidop,32.35,1e-18,FAMILY NOT NAMED,NULL; seg,NULL;
Auxin_canalis,Domain of unknown function DUF828;
PH_2,Pleckstrin-li,gene.g60855.t1.1
(1371 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP046270 similar to UniRef100_A7PUE8 Cluster: Chromosom... 440 e-122
gnl|LJGI|AV407263 similar to UniRef100_A7NWT2 Cluster: Chromosom... 88 2e-16
gnl|LJGI|TC65396 similar to UniRef100_A7NWT2 Cluster: Chromosome... 74 3e-12
>gnl|LJGI|BP046270 similar to UniRef100_A7PUE8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 549
Score = 440 bits (222), Expect = e-122
Identities = 222/222 (100%)
Strand = Plus / Minus
Query: 1150 gatgttgtgttagatgtgagcacaaatttaccagcatggccaggaaggcatctttttgat 1209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gatgttgtgttagatgtgagcacaaatttaccagcatggccaggaaggcatctttttgat 352
Query: 1210 gatggtgaaaaaagaaggtatttcggattgaagacagagtcatggggggttgtggagttt 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gatggtgaaaaaagaaggtatttcggattgaagacagagtcatggggggttgtggagttt 292
Query: 1270 gaatgtagaaatcaaagagaatatgatatctggactcaaggtgtttcaagacttctttcc 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gaatgtagaaatcaaagagaatatgatatctggactcaaggtgtttcaagacttctttcc 232
Query: 1330 attgttgcccagagacagaagcaaaacagaaaaaagatttga 1371
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 attgttgcccagagacagaagcaaaacagaaaaaagatttga 190
Score = 61.9 bits (31), Expect = 1e-08
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 1120 ggaagtgaattactcaaacggacccgtaaag 1150
|||||||||||||||||||||||||||||||
Sbjct: 549 ggaagtgaattactcaaacggacccgtaaag 519
>gnl|LJGI|AV407263 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 238
Score = 87.7 bits (44), Expect = 2e-16
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 88 ccaatggagtttctgtcaaggtcatggagtgcctctgctcttgaggtctctaaagc 143
||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 100 ccaatggagtttctgtcaaggtcatggagtgcctcagctcttgaggtttccaaagc 155
>gnl|LJGI|TC65396 similar to UniRef100_A7NWT2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (64%)
Length = 1421
Score = 73.8 bits (37), Expect = 3e-12
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 1253 ggggggttgtggagtttgaatgtagaaatcaaagagaatatgatatctggactcaaggtg 1312
|||| |||||||| ||||| || |||||||||||||| |||||| | |||||||||||||
Sbjct: 929 ggggtgttgtggaatttgagtgcagaaatcaaagagagtatgatgtgtggactcaaggtg 988
Query: 1313 tttcaagacttct 1325
| ||||| |||||
Sbjct: 989 tgtcaaggcttct 1001
Score = 56.0 bits (28), Expect = 6e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 743 agatggctaatacagacatggctgtggcttctgcagctactttggttgctgctcagtgtg 802
||||||| || || |||||||| ||||| || || || || |||| |||||||||||||
Sbjct: 296 agatggccaagacggacatggcggtggcgtcggcggccacgctggtggctgctcagtgtg 355
Query: 803 tagaagctgctgaagcaatgggagctga 830
| || ||||| ||||| |||||||||||
Sbjct: 356 ttgaggctgcggaagctatgggagctga 383