Miyakogusa Predicted Gene

Lj5g3v1003310.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v1003310.1 Non Chatacterized Hit- tr|I0YU46|I0YU46_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,44.12,5e-18,seg,NULL,CUFF.54508.1
         (498 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP050479 UniRef100_A9U166 Cluster: Predicted protein; n...   131   5e-30

>gnl|LJGI|BP050479 UniRef100_A9U166 Cluster: Predicted protein; n=1; Physcomitrella
           patens subsp. patens|Rep: Predicted protein -
           Physcomitrella patens subsp. patens, partial (11%)
          Length = 460

 Score =  131 bits (66), Expect = 5e-30
 Identities = 66/66 (100%)
 Strand = Plus / Minus

                                                                       
Query: 433 tacgtcgaagaagagaagaggttgttgagagatagtggagtctattctggttttgatgct 492
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tacgtcgaagaagagaagaggttgttgagagatagtggagtctattctggttttgatgct 401

                 
Query: 493 tgataa 498
           ||||||
Sbjct: 400 tgataa 395