Miyakogusa Predicted Gene

Lj5g3v0998790.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0998790.1 Non Chatacterized Hit- tr|I1N3M4|I1N3M4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,84.18,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat
domain,Pentatricopept,NODE_76802_length_2613_cov_10.352468.path2.1
         (2333 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74752 similar to UniRef100_A7PUD4 Cluster: Chromosome...   858   0.0  

>gnl|LJGI|TC74752 similar to UniRef100_A7PUD4 Cluster: Chromosome chr7 scaffold_31,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_31, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (21%)
          Length = 488

 Score =  858 bits (433), Expect = 0.0
 Identities = 465/477 (97%), Gaps = 2/477 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1823 tgcatgaaatcaaggaaggacagagtgtggattgtggggttcatgattggaataacgtga 1882
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 12   tgcatgaaatcaaggaaggacagagtgtggatcgtggggttcatgattggaataacgaga 71

                                                                        
Query: 1883 tccacnnnnnnn--gtaagaagagactaatgcaagatgcagaaaaggctctgaagaagat 1940
            |||||         ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72   tccacgttttttttgtaagaagagactaatgcaagatgcagaaaaggctctgaagaagat 131

                                                                        
Query: 1941 gagaagcttaggccactcacccaatgcacaaactttccattcgatggtcactgggtatgc 2000
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132  gagaagcttaggccactcacccaatgcacaaactttccattcgatggtcactgggtatgc 191

                                                                        
Query: 2001 tgccattggaggcaaatatctggaggtaaccgagctgtggggtgagatgaaatctcttgc 2060
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192  tgccattggaggcaaatatctggaggtaaccgagctgtggggtgagatgaaatctcttgc 251

                                                                        
Query: 2061 ttcttcttcatcctccatgaagtttgatcaggaacttctagattctgtgctgtatacatt 2120
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252  ttcttcgtcatcctccatgaagtttgatcaggaacttctagattctgtgctgtatacatt 311

                                                                        
Query: 2121 tgtgaggggtggattcttcactcgagccaatgaagtcgtgtccatgatggaaaaggggaa 2180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312  tgtgaggggtggattcttcactcgagccaatgaagtcgtgtccatgatggaaaaggggaa 371

                                                                        
Query: 2181 aatgttcattgacaagtacaagtacagaatgctattcttgaaatatcataaaacacttta 2240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372  aatgttcattgacaagtacaagtacagaatgctattcttgaaatatcataaaacacttta 431

                                                                     
Query: 2241 caaaggcaaggctcccaaatttcagacagaatctcagctaaacaaaagggaagcagc 2297
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432  caaaggcaaggctcccaaatttcagacagaatctcagctaaacaaaagggaagcagc 488