Miyakogusa Predicted Gene
- Lj5g3v0998790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0998790.1 Non Chatacterized Hit- tr|I1N3M4|I1N3M4_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,84.18,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat
domain,Pentatricopept,NODE_76802_length_2613_cov_10.352468.path2.1
(2333 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74752 similar to UniRef100_A7PUD4 Cluster: Chromosome... 858 0.0
>gnl|LJGI|TC74752 similar to UniRef100_A7PUD4 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 488
Score = 858 bits (433), Expect = 0.0
Identities = 465/477 (97%), Gaps = 2/477 (0%)
Strand = Plus / Plus
Query: 1823 tgcatgaaatcaaggaaggacagagtgtggattgtggggttcatgattggaataacgtga 1882
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 12 tgcatgaaatcaaggaaggacagagtgtggatcgtggggttcatgattggaataacgaga 71
Query: 1883 tccacnnnnnnn--gtaagaagagactaatgcaagatgcagaaaaggctctgaagaagat 1940
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tccacgttttttttgtaagaagagactaatgcaagatgcagaaaaggctctgaagaagat 131
Query: 1941 gagaagcttaggccactcacccaatgcacaaactttccattcgatggtcactgggtatgc 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gagaagcttaggccactcacccaatgcacaaactttccattcgatggtcactgggtatgc 191
Query: 2001 tgccattggaggcaaatatctggaggtaaccgagctgtggggtgagatgaaatctcttgc 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tgccattggaggcaaatatctggaggtaaccgagctgtggggtgagatgaaatctcttgc 251
Query: 2061 ttcttcttcatcctccatgaagtttgatcaggaacttctagattctgtgctgtatacatt 2120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ttcttcgtcatcctccatgaagtttgatcaggaacttctagattctgtgctgtatacatt 311
Query: 2121 tgtgaggggtggattcttcactcgagccaatgaagtcgtgtccatgatggaaaaggggaa 2180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgtgaggggtggattcttcactcgagccaatgaagtcgtgtccatgatggaaaaggggaa 371
Query: 2181 aatgttcattgacaagtacaagtacagaatgctattcttgaaatatcataaaacacttta 2240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aatgttcattgacaagtacaagtacagaatgctattcttgaaatatcataaaacacttta 431
Query: 2241 caaaggcaaggctcccaaatttcagacagaatctcagctaaacaaaagggaagcagc 2297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 caaaggcaaggctcccaaatttcagacagaatctcagctaaacaaaagggaagcagc 488