Miyakogusa Predicted Gene

Lj5g3v0998740.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0998740.1 tr|A9SV66|A9SV66_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_188742,52.81,5e-19,no description,NULL; no
description,Galactose oxidase, beta-propeller; A Receptor for
Ubiquitination,NODE_61861_length_527_cov_40.925995.path2.1
         (268 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60342 similar to UniRef100_Q9M1W7 Cluster: F-box/Kelc...   531   e-151

>gnl|LJGI|TC60342 similar to UniRef100_Q9M1W7 Cluster: F-box/Kelch-repeat protein
           At3g63220; n=2; Arabidopsis thaliana|Rep:
           F-box/Kelch-repeat protein At3g63220 - Arabidopsis
           thaliana (Mouse-ear cress), partial (49%)
          Length = 804

 Score =  531 bits (268), Expect = e-151
 Identities = 268/268 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctggactgattgaaggacttcctgatgctgttgcaattaggtgccttgcacgtgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgtctggactgattgaaggacttcctgatgctgttgcaattaggtgccttgcacgtgtt 350

                                                                       
Query: 61  ccgttctacctccacccaaagttagaacttgtctctcgatcttggcaagctgccattcgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ccgttctacctccacccaaagttagaacttgtctctcgatcttggcaagctgccattcgt 410

                                                                       
Query: 121 agccctgaactatttaaagctcggaaggaggtgggctcatctgaggagctgctgtgtgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agccctgaactatttaaagctcggaaggaggtgggctcatctgaggagctgctgtgtgtc 470

                                                                       
Query: 181 tgtgcttttgatccagagaacttatggcagatgtatgatcctctaagagatctctggatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tgtgcttttgatccagagaacttatggcagatgtatgatcctctaagagatctctggatt 530

                                       
Query: 241 acacttcctgttcttccctcaaagatca 268
           ||||||||||||||||||||||||||||
Sbjct: 531 acacttcctgttcttccctcaaagatca 558