Miyakogusa Predicted Gene
- Lj5g3v0977300.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0977300.1 Non Chatacterized Hit- tr|A5BG99|A5BG99_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,58.62,2e-18,F-box-like,NULL; no description,NULL; F-BOX/LRR
PROTEIN-RELATED, ARATH,NULL; F-BOX/LEUCINE RICH REP,CUFF.54468.1
(1596 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68508 similar to UniRef100_A7PUB1 Cluster: Chromosome... 952 0.0
gnl|LJGI|TC68301 similar to UniRef100_A7PUB1 Cluster: Chromosome... 787 0.0
gnl|LJGI|BI420609 similar to UniRef100_A7PUB1 Cluster: Chromosom... 414 e-115
>gnl|LJGI|TC68508 similar to UniRef100_A7PUB1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 723
Score = 952 bits (480), Expect = 0.0
Identities = 480/480 (100%)
Strand = Plus / Plus
Query: 190 gaatcgctcccttctgattctgatcagacggaactcatcgatcgcgctctcaaaattgga 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaatcgctcccttctgattctgatcagacggaactcatcgatcgcgctctcaaaattgga 303
Query: 250 tccatgctgcttgatgctgctaaacagtcctcaaggaaacgtgcttccaagcataattca 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tccatgctgcttgatgctgctaaacagtcctcaaggaaacgtgcttccaagcataattca 363
Query: 310 atcgcttggcctctccctcctgacctcactatcaaggtgttctcagctcttgatactcag 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atcgcttggcctctccctcctgacctcactatcaaggtgttctcagctcttgatactcag 423
Query: 370 agcctgtgctatgcgtctgctacttgtacattgtttaataaatgtgctaaggatcctttg 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 agcctgtgctatgcgtctgctacttgtacattgtttaataaatgtgctaaggatcctttg 483
Query: 430 tgctatgagaatcttgatttgaccacacttgttcccaaggttaacaattcagtggtttca 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgctatgagaatcttgatttgaccacacttgttcccaaggttaacaattcagtggtttca 543
Query: 490 acaatgattcagcgagctggaaaggcactgaggtctcttaagcttggtgtgatccctggt 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acaatgattcagcgagctggaaaggcactgaggtctcttaagcttggtgtgatccctggt 603
Query: 550 gctactccttcacctgggtgttgtcaaccattggtttgtcccatcagaaatgccattgta 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gctactccttcacctgggtgttgtcaaccattggtttgtcccatcagaaatgccattgta 663
Query: 610 gacgtatccaacttctcatggactgataagagatctcgacaggggagagaatcttctatt 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gacgtatccaacttctcatggactgataagagatctcgacaggggagagaatcttctatt 723
Score = 258 bits (130), Expect = 9e-68
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 1 atggcgacatcgacgaacactttcctcctcgcagctccgtcgtcaacggcgaagcgaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 atggcgacatcgacgaacactttcctcctcgcagctccgtcgtcaacggcgaagcgaccg 114
Query: 61 tgtccgtcgcaaaaccctagaccaccgccggagacactcaaccaggtggaagagcatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tgtccgtcgcaaaaccctagaccaccgccggagacactcaaccaggtggaagagcatgtc 174
Query: 121 ctcgatgcat 130
||||||||||
Sbjct: 175 ctcgatgcat 184
>gnl|LJGI|TC68301 similar to UniRef100_A7PUB1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 952
Score = 787 bits (397), Expect = 0.0
Identities = 411/418 (98%)
Strand = Plus / Plus
Query: 1179 agaggtggaagttgccaggttgctgacagcaattcttgcaggcgatttcaaatcgctcct 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggtggaagttgccaggttgctgacagcaattcttgcaggcgatttcaaatcgctcct 60
Query: 1239 acatcttgatatttccaatcgggaaggcttagcatctgagggtgattggtaccataggtg 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acatcttgatatttccaatcgggaaggcttagcatctgagggtgattggtaccataggtg 120
Query: 1299 ctacaactctagtatcatgcctgtaaagcaggttttagaagcaaggcctgatatgtgtct 1358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctacaactctagtatcatgcctgtaaagcaggttttagaagcaaggcctgatatgtgtct 180
Query: 1359 ggtagctgaatatcctcaagaaggaagttacatggactcgtttgacactgatatgaacag 1418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtagctgaatatcctcaagaaggaagttacatggactcgtttgacactgatatgaacag 240
Query: 1419 tgagataagtcttccatcacaattgagctttcatagttcagatggattggnnnnnnnaag 1478
|||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 241 tgagataagtcttccatcacaattgagctttcatagttcagatggattggtttttttaag 300
Query: 1479 tacatctgaaagcagctacaatagtgaccatggtagtggtaatgaggatggtcaagaggc 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacatctgaaagcagctacaatagtgaccatggtagtggtaatgaggatggtcaagaggc 360
Query: 1539 caactatgtaatttacgagggaagttcagacgagatagacttcttgtccctgtagggg 1596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caactatgtaatttacgagggaagttcagacgagatagacttcttgtccctgtagggg 418
>gnl|LJGI|BI420609 similar to UniRef100_A7PUB1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 543
Score = 414 bits (209), Expect = e-115
Identities = 459/542 (84%), Gaps = 9/542 (1%)
Strand = Plus / Plus
Query: 598 aatgccattgtagacgtatccaacttctcatggactgataagagatctcgacaggggaga 657
||||| ||||||||||| || ||| | ||||||| ||||||||||||||| || ||||||
Sbjct: 3 aatgctattgtagacgtttctaacatttcatggattgataagagatctcgtcaagggaga 62
Query: 658 ga---atcttctattcttacaagatcctgtttaagccccttaagtagggatgttggtgca 714
|| ||| || ||||||||||||| |||||||||||| |||||| |||| | ||||||
Sbjct: 63 gacccatcatccattcttacaagatgctgtttaagccctttaagtggggacggtggtgc- 121
Query: 715 gctgctccaggggctcttttgagaaggctgaaattgtacaatattgaaaggatggataat 774
||| |||||||||||||||| | || | ||||||||||||| || |||||||||
Sbjct: 122 -----tccgggggctcttttgagaaagttgcacctgtacaatattgagagaatggataat 176
Query: 775 gtatcacttagtggggcattatcagcatgcccttctcttcttgacttggaaattgtcggg 834
| ||| ||| |||||||||| | ||||||||||||||| ||||| |||||||||| |||
Sbjct: 177 gcatcccttggtggggcattgttagcatgcccttctctccttgatctggaaattgttggg 236
Query: 835 cttcatgttgaattgaggctaacgttgatgtcagtaagcgcgcactaccacttgattgag 894
|| ||||||||| |||||| ||| || ||||||||||| || ||| ||||||||| |||
Sbjct: 237 ctccatgttgaactgaggcaaacattaatgtcagtaagtgcaaactgccacttgatcgag 296
Query: 895 cgtttgttttttgagtcttccaaaacaggtagagacgacagtttgaaaacgcaaacctgt 954
||||||| |||||||||||| ||| |||||||||| || || |||||| ||||||| |||
Sbjct: 297 cgtttgtgttttgagtcttctaaagcaggtagagatgatagcttgaaagcgcaaacgtgt 356
Query: 955 gttgagctagtggataattgtcctcatctaacttctctgtcccttagaggttttaagcta 1014
|||||| || | ||||||||||||||| ||||| | || ||| |||| |||||||||
Sbjct: 357 tctgagctggtaaacaattgtcctcatctagcttctttatctcttcgagggtttaagcta 416
Query: 1015 catgattataaagttcgtgtactggttaagggatttcgtaaactgaaatatgttaatttt 1074
||||||| ||||| ||| ||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 417 catgattgtaaagctcgcatactggttaagggatttcggaaactgaaatatgttgacttt 476
Query: 1075 tctacatcctattcaatcaccggaagcttcttaagaaaccttggaagctacaatggtggg 1134
|| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||
Sbjct: 477 tcaacatcctattcaatcacgggaaatttcttaagaaaccttggaagctgcaatggtggg 536
Query: 1135 aa 1136
||
Sbjct: 537 aa 538