Miyakogusa Predicted Gene

Lj5g3v0976250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0976250.1 Non Chatacterized Hit- tr|K4CVG0|K4CVG0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.35,6e-18,seg,NULL,CUFF.54476.1
         (2316 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72144                                                      256   5e-67
gnl|LJGI|DC599541 similar to UniRef100_Q9BIU3 Cluster: Fibroin 2...    84   5e-15

>gnl|LJGI|TC72144 
          Length = 729

 Score =  256 bits (129), Expect = 5e-67
 Identities = 129/129 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2188 ccaaccgtcaaaagtttacctcaggagaaaggaagagactcaaagggtcataagcaaatt 2247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ccaaccgtcaaaagtttacctcaggagaaaggaagagactcaaagggtcataagcaaatt 60

                                                                        
Query: 2248 tcttttgggggaaattacaccacttcgttgccaacccaaggagcaaaggcaacaaccact 2307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tcttttgggggaaattacaccacttcgttgccaacccaaggagcaaaggcaacaaccact 120

                     
Query: 2308 caataacaa 2316
            |||||||||
Sbjct: 121  caataacaa 129


>gnl|LJGI|DC599541 similar to UniRef100_Q9BIU3 Cluster: Fibroin 2; n=1; Dolomedes
            tenebrosus|Rep: Fibroin 2 - Dolomedes tenebrosus (Nursery
            web spider), partial (4%)
          Length = 384

 Score = 83.8 bits (42), Expect = 5e-15
 Identities = 81/94 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1116 tgggcctttctactcttctcaaatactccatcctcttcagtatccacaacagcaccctca 1175
            ||||||||| ||||| ||||||||  ||||| | |||||||||||||||||||| |||||
Sbjct: 275  tgggcctttgtactcatctcaaatgttccatacccttcagtatccacaacagcatcctca 334

                                              
Query: 1176 ctcaaaagtactggttcaaccaagttatcctaat 1209
             ||  ||| | |||||||||||||||||| ||||
Sbjct: 335  ttcccaagcaatggttcaaccaagttatcttaat 368