Miyakogusa Predicted Gene
- Lj5g3v0975930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0975930.1 tr|G7IEC9|G7IEC9_MEDTR Ran GTPase activating
protein OS=Medicago truncatula GN=MTR_1g072250 PE=4 SV=,86.14,0,FAMILY
NOT NAMED,NULL; RNI-like,NULL; seg,NULL; no description,NULL; WPP,WPP
domain; LRR_6,NULL; Leu,CUFF.54455.1
(1603 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70769 similar to UniRef100_Q9SBS1 Cluster: Ran GTPase... 1065 0.0
gnl|LJGI|TC61343 similar to UniRef100_Q9SBS1 Cluster: Ran GTPase... 866 0.0
>gnl|LJGI|TC70769 similar to UniRef100_Q9SBS1 Cluster: Ran GTPase activating protein;
n=1; Medicago sativa subsp. x varia|Rep: Ran GTPase
activating protein - Medicago varia (Alfalfa), partial
(33%)
Length = 684
Score = 1065 bits (537), Expect = 0.0
Identities = 543/545 (99%)
Strand = Plus / Plus
Query: 1 atggattctgcagcgcagtcgtaccagcatcgctcactttcaatcaagttatggcctcct 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atggattctgcagcgcaatcgtaccagcatcgctcactttcaatcaagttatggcctcct 199
Query: 61 agccagagtacaaggctaatgcttgtggagcggatgaccaagaacctaactactccgtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agccagagtacaaggctaatgcttgtggagcggatgaccaagaacctaactactccgtcc 259
Query: 121 attttctctagaaagtatgggctgctgagcaaagaagaggctgaggaggatgcgaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attttctctagaaagtatgggctgctgagcaaagaagaggctgaggaggatgcgaaggaa 319
Query: 181 attgaggatgtagcttttgctaatgctgcccaacactttgagaaggagcctgatggtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attgaggatgtagcttttgctaatgctgcccaacactttgagaaggagcctgatggtgat 379
Query: 241 gggagttctgctgtgcagatttatgccaaggagtctagtaagcttatgttggaggtgttg 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggagttctgctgtacagatttatgccaaggagtctagtaagcttatgttggaggtgttg 439
Query: 301 aaaagaggaccaaaagtgaaggatgatggagaattggtatctgagaaggctggttctact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaagaggaccaaaagtgaaggatgatggagaattggtatctgagaaggctggttctact 499
Query: 361 gctgaaactgtttttgacatatctgggggtcgcagagcttttattgatggggaggaagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctgaaactgtttttgacatatctgggggtcgcagagcttttattgatggggaggaagct 559
Query: 421 gctgaacttttgaaaccattgagggggccaaactcttatactaagatatgtttcagcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctgaacttttgaaaccattgagggggccaaactcttatactaagatatgtttcagcaat 619
Query: 481 aggagttttggcttggatgctgctcatgtagctgagcccatccttatatcaattaaggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aggagttttggcttggatgctgctcatgtagctgagcccatccttatatcaattaaggat 679
Query: 541 caatt 545
|||||
Sbjct: 680 caatt 684
>gnl|LJGI|TC61343 similar to UniRef100_Q9SBS1 Cluster: Ran GTPase activating protein;
n=1; Medicago sativa subsp. x varia|Rep: Ran GTPase
activating protein - Medicago varia (Alfalfa), partial
(27%)
Length = 763
Score = 866 bits (437), Expect = 0.0
Identities = 437/437 (100%)
Strand = Plus / Plus
Query: 1167 ggctgggaatgacataactgcaaaagctgctgcatctgtggctgcctgcatatcatcaaa 1226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggctgggaatgacataactgcaaaagctgctgcatctgtggctgcctgcatatcatcaaa 60
Query: 1227 gcagttcctaaccaagttaaatttatctgaaaatgaactgaaggatgaaggtgcagtttt 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagttcctaaccaagttaaatttatctgaaaatgaactgaaggatgaaggtgcagtttt 120
Query: 1287 gatcagtaaggcactggaagaaggtcacggccaattaaatgaagttgatttaaacacaaa 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatcagtaaggcactggaagaaggtcacggccaattaaatgaagttgatttaaacacaaa 180
Query: 1347 ctcaatcacatggtcaggagctaggctgttggcagaagctgttgttcaaaaacctggatt 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctcaatcacatggtcaggagctaggctgttggcagaagctgttgttcaaaaacctggatt 240
Query: 1407 taagttgctaaacattaatactaacttcatttctgaagaaggtgtcgatgagttgaagaa 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taagttgctaaacattaatactaacttcatttctgaagaaggtgtcgatgagttgaagaa 300
Query: 1467 tatatttaaaaattcgcctgatacgctgggtcctttggatgagaatgatcctgaaggaga 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatatttaaaaattcgcctgatacgctgggtcctttggatgagaatgatcctgaaggaga 360
Query: 1527 ggacaatgactatgaggctgaagaagatgatgagcatgatgagttggaatcaaaactgaa 1586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggacaatgactatgaggctgaagaagatgatgagcatgatgagttggaatcaaaactgaa 420
Query: 1587 gggccttggcatttaga 1603
|||||||||||||||||
Sbjct: 421 gggccttggcatttaga 437