Miyakogusa Predicted Gene
- Lj5g3v0975430.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0975430.1 Non Chatacterized Hit- tr|I3T1V6|I3T1V6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,99.13,0,snRNP Sm
proteins,Ribonucleoprotein LSM domain, eukaryotic/archaea-type;
LSM,Ribonucleoprotein LSM d,CUFF.54415.1
(351 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65253 696 0.0
gnl|LJGI|TC70827 355 1e-97
gnl|LJGI|TC62396 355 1e-97
>gnl|LJGI|TC65253
Length = 636
Score = 696 bits (351), Expect = 0.0
Identities = 351/351 (100%)
Strand = Plus / Plus
Query: 1 atgaagctcgtcaggtttctgatgaagttgaacaatgaaaccgtatcaatcgaactcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atgaagctcgtcaggtttctgatgaagttgaacaatgaaaccgtatcaatcgaactcaag 194
Query: 61 aatggtaccattgttcatggcaccattacaggtgttgatatcagtatgaatacacatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aatggtaccattgttcatggcaccattacaggtgttgatatcagtatgaatacacatttg 254
Query: 121 aaggcagtaaaactaacactgaaagggaaaaacccagtgactctggatcatcttagtgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaggcagtaaaactaacactgaaagggaaaaacccagtgactctggatcatcttagtgtg 314
Query: 181 agaggtaccaacattcgttattatatccttcctgacagcttgaatcttgagactttgctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agaggtaccaacattcgttattatatccttcctgacagcttgaatcttgagactttgctg 374
Query: 241 gttgaagaggcacctagagtcaagcctaagaagccaactgctgggaagcctttggggcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gttgaagaggcacctagagtcaagcctaagaagccaactgctgggaagcctttggggcgt 434
Query: 301 gggcgaggccggggtcgtggacgtggtcgtggtcgtggtggtcgttgaatt 351
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gggcgaggccggggtcgtggacgtggtcgtggtcgtggtggtcgttgaatt 485
>gnl|LJGI|TC70827
Length = 720
Score = 355 bits (179), Expect = 1e-97
Identities = 307/349 (87%), Gaps = 3/349 (0%)
Strand = Plus / Plus
Query: 1 atgaagctcgtcaggtttctgatgaagttgaacaatgaaaccgtatcaatcgaactcaag 60
|||||||||||||||||||| |||||||||||||| ||||| || || ||||| || |||
Sbjct: 117 atgaagctcgtcaggtttctcatgaagttgaacaacgaaactgtttccatcgagcttaag 176
Query: 61 aatggtaccattgttcatggcaccattacaggtgttgatatcagtatgaatacacatttg 120
|| || || ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 aacgggactattgtccatggcaccattacaggtgttgatatcagtatgaatacacatttg 236
Query: 121 aaggcagtaaaactaacactgaaagggaaaaacccagtgactctggatcatcttagtgtg 180
|| |||| |||||||| |||||||||||||| ||||| ||| |||||||||| |||||
Sbjct: 237 aaaacagttaaactaaccctgaaagggaaaaatccagttactttggatcatctcagtgta 296
Query: 181 agaggtaccaacattcgttattatatccttcctgacagcttgaatcttgagactttgctg 240
|| || | |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 297 aggggcaacaacattcgttattatatccttcctgacagcttgaatcttgagactttactg 356
Query: 241 gttgaagaggcacctagagtcaagcctaagaagccaactgct---gggaagcctttgggg 297
||||||||| | ||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 357 gttgaagagacccctagggtcaaacctaagaagccaactgctggggggaagcctttggga 416
Query: 298 cgtgggcgaggccggggtcgtggacgtggtcgtggtcgtggtggtcgtt 346
|| || || || || || |||||||| || || ||||||||||| ||||
Sbjct: 417 cgaggacgggggcgtggacgtggacgcggccgaggtcgtggtggccgtt 465
>gnl|LJGI|TC62396
Length = 704
Score = 355 bits (179), Expect = 1e-97
Identities = 307/349 (87%), Gaps = 3/349 (0%)
Strand = Plus / Plus
Query: 1 atgaagctcgtcaggtttctgatgaagttgaacaatgaaaccgtatcaatcgaactcaag 60
|||||||||||||||||||| |||||||||||||| ||||| || || ||||| || |||
Sbjct: 70 atgaagctcgtcaggtttctcatgaagttgaacaacgaaactgtttccatcgagcttaag 129
Query: 61 aatggtaccattgttcatggcaccattacaggtgttgatatcagtatgaatacacatttg 120
|| || || ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aacgggactattgtccatggcaccattacaggtgttgatatcagtatgaatacacatttg 189
Query: 121 aaggcagtaaaactaacactgaaagggaaaaacccagtgactctggatcatcttagtgtg 180
|| |||| |||||||| |||||||||||||| ||||| ||| |||||||||| |||||
Sbjct: 190 aaaacagttaaactaaccctgaaagggaaaaatccagttactttggatcatctcagtgta 249
Query: 181 agaggtaccaacattcgttattatatccttcctgacagcttgaatcttgagactttgctg 240
|| || | |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 250 aggggcaacaacattcgttattatatccttcctgacagcttgaatcttgagactttactg 309
Query: 241 gttgaagaggcacctagagtcaagcctaagaagccaactgct---gggaagcctttgggg 297
||||||||| | ||||| ||||| |||||||||||||||||| ||||||||||||||
Sbjct: 310 gttgaagagacccctagggtcaaacctaagaagccaactgctggggggaagcctttggga 369
Query: 298 cgtgggcgaggccggggtcgtggacgtggtcgtggtcgtggtggtcgtt 346
|| || || || || || |||||||| || || ||||||||||| ||||
Sbjct: 370 cgaggacgggggcgtggacgtggacgcggccgaggtcgtggtggccgtt 418