Miyakogusa Predicted Gene
- Lj5g3v0963080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0963080.1 Non Chatacterized Hit- tr|I3IC32|I3IC32_9GAMM
Uncharacterized protein OS=Cellvibrio sp. BR
GN=O59_00,60.24,6e-19,Diaminopimelate epimerase-like,NULL; no
description,NULL; PhzC-PhzF,Phenazine biosynthesis PhzF
prot,gene.g60658.t1.1
(261 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59349 similar to UniRef100_A7PU87 Cluster: Chromosome... 494 e-139
gnl|LJGI|TC75128 similar to UniRef100_A7PU87 Cluster: Chromosome... 321 1e-87
gnl|LJGI|AV766634 similar to UniRef100_A7PU86 Cluster: Chromosom... 283 3e-76
gnl|LJGI|BP037720 similar to UniRef100_A7PU88 Cluster: Chromosom... 125 1e-28
>gnl|LJGI|TC59349 similar to UniRef100_A7PU87 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (81%)
Length = 1245
Score = 494 bits (249), Expect = e-139
Identities = 258/261 (98%)
Strand = Plus / Plus
Query: 1 atggctcctccagattcgggatttgacttctatagtcgatacttctgcccaaaatttgga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 665 atggctcctccagattcgggatttgacttctatagtcgatacttctgcccaaaacttgga 724
Query: 61 atcaatgaggatcctgtttgtgggagtgcacattgtgccttagcatcctactggagcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 atcaatgaggatcctgtttgtgggagtgcacattgtgccttagcatcctactggagcaag 784
Query: 121 aagctggggatgtgtgattttaatgcttatcaggcatcacccagagggggagctctcatt 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aagctggggaagtgtgattttaatgcttatcaggcatcacccagagggggagctctcatt 844
Query: 181 agtcatcttgatgaggagaaccaaagagtgctattgcgtgggaaggcggtcacagtgatg 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 attcatcttgatgaggagaaccaaagagtgctattgcgtgggaaggcggtcacagtgatg 904
Query: 241 gaagggtgtattctggcctag 261
|||||||||||||||||||||
Sbjct: 905 gaagggtgtattctggcctag 925
>gnl|LJGI|TC75128 similar to UniRef100_A7PU87 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1179
Score = 321 bits (162), Expect = 1e-87
Identities = 234/258 (90%)
Strand = Plus / Plus
Query: 4 gctcctccagattcgggatttgacttctatagtcgatacttctgcccaaaatttggaatc 63
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 718 gctcctccagagtcgggatttgacttctatagtcgattcttctgcccaaaatttggagtc 777
Query: 64 aatgaggatcctgtttgtgggagtgcacattgtgccttagcatcctactggagcaagaag 123
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 778 gatgaggatcctgtttgtgggactgcacattgtgccttagcatcctactggagtaagaag 837
Query: 124 ctggggatgtgtgattttaatgcttatcaggcatcacccagagggggagctctcattagt 183
|| |||| ||||||||| | |||| ||||||||||||||||||||||| |||| || |
Sbjct: 838 ctagggaagtgtgatttcattgctaatcaggcatcacccagagggggaattctccatatt 897
Query: 184 catcttgatgaggagaaccaaagagtgctattgcgtgggaaggcggtcacagtgatggaa 243
||||||||||||||||||||| ||||| | |||||||||||||| || || |||||||||
Sbjct: 898 catcttgatgaggagaaccaacgagtgttcttgcgtgggaaggctgttacggtgatggaa 957
Query: 244 gggtgtattctggcctag 261
|||||| |||||| ||||
Sbjct: 958 gggtgtgttctggtctag 975
>gnl|LJGI|AV766634 similar to UniRef100_A7PU86 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 469
Score = 283 bits (143), Expect = 3e-76
Identities = 209/231 (90%)
Strand = Plus / Minus
Query: 19 ggatttgacttctatagtcgatacttctgcccaaaatttggaatcaatgaggatcctgtt 78
|||||||||||||| | ||||| |||| |||||||| |||| |||||||||||||||||
Sbjct: 460 ggatttgacttctacactcgattcttcgtcccaaaatatggagtcaatgaggatcctgtt 401
Query: 79 tgtgggagtgcacattgtgccttagcatcctactggagcaagaagctggggatgtgtgat 138
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 400 tgtgggagtgcacattgtgccttggcatcctactggagcaagaagctggggaagtgtgat 341
Query: 139 tttaatgcttatcaggcatcacccagagggggagctctcattagtcatcttgatgaggag 198
||||| |||||||||||||| |||||||||||| ||||| || ||||||||||||||||
Sbjct: 340 tttaaagcttatcaggcatcgcccagagggggaattctcaatattcatcttgatgaggag 281
Query: 199 aaccaaagagtgctattgcgtgggaaggcggtcacagtgatggaagggtgt 249
|||||||||||| | |||||||| | ||| || || |||||||||||||||
Sbjct: 280 aaccaaagagtgttcttgcgtggtacggcagttacggtgatggaagggtgt 230
>gnl|LJGI|BP037720 similar to UniRef100_A7PU88 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 373
Score = 125 bits (63), Expect = 1e-28
Identities = 111/127 (87%)
Strand = Plus / Minus
Query: 135 tgattttaatgcttatcaggcatcacccagagggggagctctcattagtcatcttgatga 194
|||||| | |||| ||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 373 tgatttcattgctaatcaggcatcacccagagggggaattctccatattcatcttgatga 314
Query: 195 ggagaaccaaagagtgctattgcgtgggaaggcggtcacagtgatggaagggtgtattct 254
|||||||||| ||||| | |||||||||||||| || || ||||||||||||||| ||||
Sbjct: 313 ggagaaccaacgagtgttcttgcgtgggaaggctgttacggtgatggaagggtgtgttct 254
Query: 255 ggcctag 261
|| ||||
Sbjct: 253 ggtctag 247