Miyakogusa Predicted Gene
- Lj5g3v0962480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0962480.1 tr|G7IEG4|G7IEG4_MEDTR Hepatoma-derived growth
factor-related protein OS=Medicago truncatula
GN=MTR_,67.7,0,PWWP,PWWP; CID,RNA polymerase II, large subunit, CTD;
domain with conserved PWWP motif,PWWP; no desc,CUFF.54394.1
(4122 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO021975 similar to UniRef100_A7PU75 Cluster: Chromosom... 1332 0.0
gnl|LJGI|TC62389 similar to UniRef100_Q9ZS47 Cluster: Arbuscular... 1041 0.0
gnl|LJGI|AV410255 homologue to UniRef100_Q49MA6 Cluster: Nuclear... 850 0.0
>gnl|LJGI|GO021975 similar to UniRef100_A7PU75 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 672
Score = 1332 bits (672), Expect = 0.0
Identities = 672/672 (100%)
Strand = Plus / Plus
Query: 2398 gcagtatctggtcctcttgatggaagtaaaaatgggtatacagcaactcaacaatcaaga 2457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagtatctggtcctcttgatggaagtaaaaatgggtatacagcaactcaacaatcaaga 60
Query: 2458 tccacgggcaagtcaactgaagcagcacgtgctgctttgaagtactttcaagcaaccctt 2517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tccacgggcaagtcaactgaagcagcacgtgctgctttgaagtactttcaagcaaccctt 120
Query: 2518 gcaactttgacaaggacgaaggaaagtattggtcgagcaacacgcatagctattgactgt 2577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcaactttgacaaggacgaaggaaagtattggtcgagcaacacgcatagctattgactgt 180
Query: 2578 gcaaaatttggtcttgcagcaaaggtcatggaaagtcttgctcacaatctggaagaatca 2637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaaaatttggtcttgcagcaaaggtcatggaaagtcttgctcacaatctggaagaatca 240
Query: 2638 agcttgcagcgaagggtggatttgttttttcttgtggattctattgcgcagtctcgaggt 2697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcttgcagcgaagggtggatttgttttttcttgtggattctattgcgcagtctcgaggt 300
Query: 2698 ttaaaaggtgatgtttgtggagtatatccatctgctatccaagcagtccttccacgacta 2757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttaaaaggtgatgtttgtggagtatatccatctgctatccaagcagtccttccacgacta 360
Query: 2758 ttatccgcagctgctcctcctgggaataccgcacaagaaaaccggaggcagtgtcgcaag 2817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttatccgcagctgctcctcctgggaataccgcacaagaaaaccggaggcagtgtcgcaag 420
Query: 2818 gttttaaaggtgtggttggagagaaaaatcctaccggagtctcttattcgccatcatatc 2877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttttaaaggtgtggttggagagaaaaatcctaccggagtctcttattcgccatcatatc 480
Query: 2878 cgggaactggacttacgtagcagctcagcttttgctggtccattttcacgacgaacatca 2937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cgggaactggacttacgtagcagctcagcttttgctggtccattttcacgacgaacatca 540
Query: 2938 agaacagaacgggccttggatgaccctattagagatatggagggcatgcttgttgacgaa 2997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaacagaacgggccttggatgaccctattagagatatggagggcatgcttgttgacgaa 600
Query: 2998 tatggaagcaactcaagttttcagctgcctggattttgcatgccccggatgctgaaagat 3057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatggaagcaactcaagttttcagctgcctggattttgcatgccccggatgctgaaagat 660
Query: 3058 gaagatggtgat 3069
||||||||||||
Sbjct: 661 gaagatggtgat 672
>gnl|LJGI|TC62389 similar to UniRef100_Q9ZS47 Cluster: Arbuscular mycorrhiza protein;
n=1; Pisum sativum|Rep: Arbuscular mycorrhiza protein -
Pisum sativum (Garden pea), partial (73%)
Length = 873
Score = 1041 bits (525), Expect = 0.0
Identities = 525/525 (100%)
Strand = Plus / Plus
Query: 3598 gaacctacttgctctttcaatagtttccctgcgccaccttcagacaacgttcgacattct 3657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaacctacttgctctttcaatagtttccctgcgccaccttcagacaacgttcgacattct 61
Query: 3658 gatggtgttactatgcataataaagggtatcctataagaccccctcggcacgtgccatcc 3717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gatggtgttactatgcataataaagggtatcctataagaccccctcggcacgtgccatcc 121
Query: 3718 aatcagttttcttttgttcatgaggaacgtcatatgaatcatcgaagggaggttccacca 3777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aatcagttttcttttgttcatgaggaacgtcatatgaatcatcgaagggaggttccacca 181
Query: 3778 ccaccgccacccccttcttaccccaataggcaacactttgtggagaacatggagagagag 3837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccaccgccacccccttcttaccccaataggcaacactttgtggagaacatggagagagag 241
Query: 3838 aacttctacaataatcatgagagaataaaaccacctccatttgatcaccgagatagatgg 3897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacttctacaataatcatgagagaataaaaccacctccatttgatcaccgagatagatgg 301
Query: 3898 aatggtcctggaccttatcctggtcctcggtatcaggacaacggtgcgcctcctccatat 3957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aatggtcctggaccttatcctggtcctcggtatcaggacaacggtgcgcctcctccatat 361
Query: 3958 ggttgtcatccatatgaatcacctagaatgccaggccatgggtggagatttcctccccgg 4017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggttgtcatccatatgaatcacctagaatgccaggccatgggtggagatttcctccccgg 421
Query: 4018 tcagggaaccacaaccacaggagttctgctccatttagaccaccctttgaagatgcaatt 4077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcagggaaccacaaccacaggagttctgctccatttagaccaccctttgaagatgcaatt 481
Query: 4078 ccagttgcaaatagaggtccaaacttttggcggcctaggtgacga 4122
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccagttgcaaatagaggtccaaacttttggcggcctaggtgacga 526
>gnl|LJGI|AV410255 homologue to UniRef100_Q49MA6 Cluster: Nuclear receptor 2DBD-gamma;
n=1; Schistosoma mansoni|Rep: Nuclear receptor 2DBD-gamma
-, partial (0%)
Length = 429
Score = 850 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Plus
Query: 1607 cgtgtataggcagtaataatcaaggagatgatggttttggggtgcaaaagttggatttgt 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtgtataggcagtaataatcaaggagatgatggttttggggtgcaaaagttggatttgt 60
Query: 1667 taacctgttcaaatccaatgatttcaacagtgaataaatcttctaaactagtggatgagc 1726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taacctgttcaaatccaatgatttcaacagtgaataaatcttctaaactagtggatgagc 120
Query: 1727 agttgaccaagtttgaactgcatgaacctgccaaggatgttctcccaagtgctgcagatc 1786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttgaccaagtttgaactgcatgaacctgccaaggatgttctcccaagtgctgcagatc 180
Query: 1787 cagttggtgaggagcttattagtaatgttgtttgtcaaacggctaaagaagatatggaag 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cagttggtgaggagcttattagtaatgttgtttgtcaaacggctaaagaagatatggaag 240
Query: 1847 ttcgtgaacaaaattctcctaatcttgattcgaaaggttatgaagctggaagcacaccgg 1906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcgtgaacaaaattctcctaatcttgattcgaaaggttatgaagctggaagcacaccgg 300
Query: 1907 aaccatcattaccacttaatggtgaggacaatattacaacagtgaatcattcaaatacat 1966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaccatcattaccacttaatggtgaggacaatattacaacagtgaatcattcaaatacat 360
Query: 1967 catctgaagtgtcagaacccaatggaataagctgtcatcctgcggcagatgtgaacaaga 2026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catctgaagtgtcagaacccaatggaataagctgtcatcctgcggcagatgtgaacaaga 420
Query: 2027 gtgatatta 2035
|||||||||
Sbjct: 421 gtgatatta 429