Miyakogusa Predicted Gene
- Lj5g3v0962370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0962370.1 Non Chatacterized Hit- tr|C4JBA6|C4JBA6_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,67.61,1e-16,seg,NULL;
coiled-coil,NULL; PGBD-like,Peptidoglycan binding-like; no
description,Peptidoglycan bindi,CUFF.54343.1
(1176 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77568 similar to UniRef100_A9THX0 Cluster: Predicted ... 1380 0.0
gnl|LJGI|TC72711 similar to UniRef100_A7NXU5 Cluster: Chromosome... 686 0.0
gnl|LJGI|AV771262 143 3e-33
>gnl|LJGI|TC77568 similar to UniRef100_A9THX0 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(16%)
Length = 739
Score = 1380 bits (696), Expect = 0.0
Identities = 696/696 (100%)
Strand = Plus / Plus
Query: 1 atgtcttcctcctctctcgttcccttcaccgtaaccgccactatccttttcaacagaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44 atgtcttcctcctctctcgttcccttcaccgtaaccgccactatccttttcaacagaacc 103
Query: 61 ctctcacttcccaaacctcacttcatctctctctcctataaatccaaaccctcctccgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 ctctcacttcccaaacctcacttcatctctctctcctataaatccaaaccctcctccgtc 163
Query: 121 tgctactgctccaactccgatcgcgaggaccaacggtggctgcgcgaggagcagcggtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tgctactgctccaactccgatcgcgaggaccaacggtggctgcgcgaggagcagcggtgg 223
Query: 181 ctgcgcgaggaacagcgctggctccgcgaggagcagcgctggactcgcgaccgcgaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ctgcgcgaggaacagcgctggctccgcgaggagcagcgctggactcgcgaccgcgaagag 283
Query: 241 cttctcagggagatttccgagcttaagctgcagatccaaaccctagaacaccgccttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 cttctcagggagatttccgagcttaagctgcagatccaaaccctagaacaccgccttctg 343
Query: 301 tcttcaccgtcttcggtttccgacgcggttgcgaaggtggcgtcgttgttgcaggtgttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcttcaccgtcttcggtttccgacgcggttgcgaaggtggcgtcgttgttgcaggtgttg 403
Query: 361 aaggacaaggatttggttctcgagagtggttccagtctccggaggttgttgcttgaggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aaggacaaggatttggttctcgagagtggttccagtctccggaggttgttgcttgaggag 463
Query: 421 gagaacacggaggagaaggaatctgaagaggttattgaacatgagaaggagattgtggtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gagaacacggaggagaaggaatctgaagaggttattgaacatgagaaggagattgtggtg 523
Query: 481 gttgaggaggctgctgctgcttctagggttgaaaagaggagcacgttgcgggtaggttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 gttgaggaggctgctgctgcttctagggttgaaaagaggagcacgttgcgggtaggttct 583
Query: 541 gaaggagaagaggttcgccagatgcaggaagcgttgctcaaattggggttctattctggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gaaggagaagaggttcgccagatgcaggaagcgttgctcaaattggggttctattctggg 643
Query: 601 gaggaagacatggagttttccagcttctcgagtggaactgagcgtgctgtgaagacttgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gaggaagacatggagttttccagcttctcgagtggaactgagcgtgctgtgaagacttgg 703
Query: 661 caagcttcattaggtgcccctgaggatggtatcatg 696
||||||||||||||||||||||||||||||||||||
Sbjct: 704 caagcttcattaggtgcccctgaggatggtatcatg 739
>gnl|LJGI|TC72711 similar to UniRef100_A7NXU5 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (39%)
Length = 542
Score = 686 bits (346), Expect = 0.0
Identities = 346/346 (100%)
Strand = Plus / Plus
Query: 831 aacagaaatttccgatattcagcaaaaggtagtggggggaggtgttaaagaaacagaagc 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacagaaatttccgatattcagcaaaaggtagtggggggaggtgttaaagaaacagaagc 60
Query: 891 ctcccgtccgagagttttcctccttggagagaatcgatgggaagattcctcaaaacttgg 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctcccgtccgagagttttcctccttggagagaatcgatgggaagattcctcaaaacttgg 120
Query: 951 tgcgagcgatggagttgataggagcaagaacaaggatggaaccacaaaatgcgttcaatg 1010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgcgagcgatggagttgataggagcaagaacaaggatggaaccacaaaatgcgttcaatg 180
Query: 1011 tcgtggggaaggtcgcttgctttgtacagaatgtgatggaggtggcgagccaaatattga 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcgtggggaaggtcgcttgctttgtacagaatgtgatggaggtggcgagccaaatattga 240
Query: 1071 gcctcaatttatggaattggtggaggacggtacaaagtgcccatactgtgaaggcctagg 1130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcctcaatttatggaattggtggaggacggtacaaagtgcccatactgtgaaggcctagg 300
Query: 1131 gtacactccatgtgatttatgtggagggatacctacggtataggtt 1176
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtacactccatgtgatttatgtggagggatacctacggtataggtt 346
>gnl|LJGI|AV771262
Length = 360
Score = 143 bits (72), Expect = 3e-33
Identities = 123/136 (90%), Gaps = 3/136 (2%)
Strand = Plus / Minus
Query: 1044 tgatggaggtggcgagccaaatattgagcctcaatttatggaattggtggaggacggtac 1103
|||||||||||||||||| |||| |||||||| | ||||||||||||||||||||| |
Sbjct: 343 tgatggaggtggcgagcccaatactgagcctccacctatggaattggtggaggacggacc 284
Query: 1104 aaagtg-cccata-ctgtgaaggcctagggtacactcca-tgtgatttatgtggagggat 1160
||||| |||||| | ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 283 caagtgccccatacccgtgaaggcctagggtacactccactgtgacttatgtggagggat 224
Query: 1161 acctacggtataggtt 1176
||||||||||||||||
Sbjct: 223 acctacggtataggtt 208