Miyakogusa Predicted Gene

Lj5g3v0921300.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0921300.1 Non Chatacterized Hit- tr|I1L2L8|I1L2L8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.32,0,no
description,Protein phosphatase 2C-like; PROTEIN PHOSPHATASE-2C,NULL;
PROTEIN PHOSPHATASE 2C,Prot,CUFF.54263.1
         (1173 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72236 similar to UniRef100_A7PVW6 Cluster: Chromosome...   795   0.0  
gnl|LJGI|TC68842 similar to UniRef100_Q8LFQ7 Cluster: Protein ph...   624   e-178

>gnl|LJGI|TC72236 similar to UniRef100_A7PVW6 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (31%)
          Length = 699

 Score =  795 bits (401), Expect = 0.0
 Identities = 401/401 (100%)
 Strand = Plus / Plus

                                                                        
Query: 773  gccgaccagtgctaactgcagaaccatctatatgttcaagagttttacaacctaatgata 832
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gccgaccagtgctaactgcagaaccatctatatgttcaagagttttacaacctaatgata 60

                                                                        
Query: 833  aattcattatatttgcatctgacgggctttgggatcacttgacgaatcaagaagccgccg 892
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aattcattatatttgcatctgacgggctttgggatcacttgacgaatcaagaagccgccg 120

                                                                        
Query: 893  aaattgttcataacaacccgcgaactggaattgcaagaagacttcttaaggcggctttga 952
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  aaattgttcataacaacccgcgaactggaattgcaagaagacttcttaaggcggctttga 180

                                                                        
Query: 953  atgaagcagctaggaaagggaagaggacatataaagagcttcagaaggttaaaaagggga 1012
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  atgaagcagctaggaaagggaagaggacatataaagagcttcagaaggttaaaaagggga 240

                                                                        
Query: 1013 tgaggcgttgtttccatgatgatatcacagtaattgttgtcttcattgaccatgagttac 1072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tgaggcgttgtttccatgatgatatcacagtaattgttgtcttcattgaccatgagttac 300

                                                                        
Query: 1073 ttgggaagaggaatgttccagttcctcaggtttccatcaaaggttttattgacacggttg 1132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ttgggaagaggaatgttccagttcctcaggtttccatcaaaggttttattgacacggttg 360

                                                     
Query: 1133 gaccatcacagtttagaagtttccaggaaatggaatgagta 1173
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  gaccatcacagtttagaagtttccaggaaatggaatgagta 401


>gnl|LJGI|TC68842 similar to UniRef100_Q8LFQ7 Cluster: Protein phosphatase 2C-like;
           n=1; Arabidopsis thaliana|Rep: Protein phosphatase
           2C-like - Arabidopsis thaliana (Mouse-ear cress),
           partial (24%)
          Length = 782

 Score =  624 bits (315), Expect = e-178
 Identities = 315/315 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttttcgtggttggcaagggcattttctgcgtgcttgagacctgtaaggcaatatgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atgttttcgtggttggcaagggcattttctgcgtgcttgagacctgtaaggcaatatgca 527

                                                                       
Query: 61  cgcatgagcaaggatgataatgatgatggttccgatagtccatcaacggtggatgacgcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cgcatgagcaaggatgataatgatgatggttccgatagtccatcaacggtggatgacgcg 587

                                                                       
Query: 121 cttgtttggttcagggaccttgagaagcactcgggtggtgaattctccttcgcggtggtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cttgtttggttcagggaccttgagaagcactcgggtggtgaattctccttcgcggtggtt 647

                                                                       
Query: 181 caggctaacgaagttcttgaagatcatagccaggttgagactggttctgatggtgtcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 caggctaacgaagttcttgaagatcatagccaggttgagactggttctgatggtgtcttt 707

                                                                       
Query: 241 gtcggtgtctacgatggccatggcggtcctgaagcttctcggttcataaatgatcacctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gtcggtgtctacgatggccatggcggtcctgaagcttctcggttcataaatgatcacctt 767

                          
Query: 301 tttcgtcatctcatg 315
           |||||||||||||||
Sbjct: 768 tttcgtcatctcatg 782