Miyakogusa Predicted Gene
- Lj5g3v0921280.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0921280.2 Non Chatacterized Hit- tr|K4DJP7|K4DJP7_TRYCR
Tryptophanyl-tRNA synthetase, putative OS=Trypanosoma
,28.77,0.000000000005,no description,Rossmann-like alpha/beta/alpha
sandwich fold; no description,NULL; OS03G0335600 PROTE,CUFF.54260.2
(816 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62206 similar to UniRef100_A7QIX2 Cluster: Chromosome... 1035 0.0
gnl|LJGI|TC61989 similar to UniRef100_P93363 Cluster: Tyrosyl-tR... 952 0.0
gnl|LJGI|TC58633 similar to UniRef100_P93363 Cluster: Tyrosyl-tR... 593 e-169
>gnl|LJGI|TC62206 similar to UniRef100_A7QIX2 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 854
Score = 1035 bits (522), Expect = 0.0
Identities = 522/522 (100%)
Strand = Plus / Plus
Query: 295 gacatttgccaattaggaatggatcagaggaaagtgaatgtacttgccagagagtattgt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacatttgccaattaggaatggatcagaggaaagtgaatgtacttgccagagagtattgt 60
Query: 355 gatgacattaagaggaggaacaagcccattatcttatcacaccacatgttacctggccta 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgacattaagaggaggaacaagcccattatcttatcacaccacatgttacctggccta 120
Query: 415 caacaagggcaagacaagatgtcaaaaagtgacccatcatcatccgttttcatggaagat 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caacaagggcaagacaagatgtcaaaaagtgacccatcatcatccgttttcatggaagat 180
Query: 475 gaggaggctgaggtgaatgtgaaaataaaaaaggcttattgcccgccaaaaattgtggaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaggaggctgaggtgaatgtgaaaataaaaaaggcttattgcccgccaaaaattgtggaa 240
Query: 535 ggaaacccatgcttggagtacattaaatatcttatcttcccctggtttaatgagttcaca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaaacccatgcttggagtacattaaatatcttatcttcccctggtttaatgagttcaca 300
Query: 595 gtggagcgtaatgcagataatggtgggaataagacatttaaaagctctgaagagctggtt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggagcgtaatgcagataatggtgggaataagacatttaaaagctctgaagagctggtt 360
Query: 655 gctgcctatgaaagtggagagttacatccgggtgaccttaaaccagccttggcgaagtca 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctgcctatgaaagtggagagttacatccgggtgaccttaaaccagccttggcgaagtca 420
Query: 715 ttgaataaaattcttgagcctgtaagggaacacttcagaaaggacaacaatgctaaagag 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgaataaaattcttgagcctgtaagggaacacttcagaaaggacaacaatgctaaagag 480
Query: 775 ctgctaaaaagggtcaaggcttacagaatcaccaagtaatat 816
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctgctaaaaagggtcaaggcttacagaatcaccaagtaatat 522
>gnl|LJGI|TC61989 similar to UniRef100_P93363 Cluster: Tyrosyl-tRNA synthetase; n=1;
Nicotiana tabacum|Rep: Tyrosyl-tRNA synthetase -
Nicotiana tabacum (Common tobacco), partial (85%)
Length = 1524
Score = 952 bits (480), Expect = 0.0
Identities = 720/801 (89%), Gaps = 1/801 (0%)
Strand = Plus / Plus
Query: 1 atggggggagatttgaagaaaattgagattgtcggccgctatttgatcgaaatttggaaa 60
||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 433 atgggtggagatttgaagaaaattgagattgttggccgctacttgattgaaatttggaaa 492
Query: 61 gctgttgggatggatctggaaggggggaaggttgagtttttgtggtcgtcgaaagagatt 120
||||||||||||||||| |||||||| || || |||||||| ||||| || |||||||||
Sbjct: 493 gctgttgggatggatctagaagggggtaaagtcgagtttttatggtcatctaaagagatt 552
Query: 121 aacgctagagctcatgaatactggcctctagtgttggatatagctcagaagaacaacctt 180
||||| |||||| |||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct: 553 aacgccagagctgatgaatactggcctcttgtgttggatatagctcagaagaataatctt 612
Query: 181 aaaaggattatcaggtgtagccaaataatggggcggggtgaacatgaagaattgactgct 240
||||| |||||||| ||||||||||||||||| ||| | ||||| || ||||||||||||
Sbjct: 613 aaaagaattatcagatgtagccaaataatgggacggagcgaacaagacgaattgactgct 672
Query: 241 gcacagatattctatccatgcatgcagtgtgctgacannnnnnncctcaaggctgacatt 300
|| || ||||||||||||||||||||||||||||||| ||| ||| |||||||
Sbjct: 673 gctcaaatattctatccatgcatgcagtgtgctgacatatttttcctgaagactgacatc 732
Query: 301 tgccaattaggaatggatcagaggaaagtgaatgtacttgccagagagtattgtgatgac 360
|||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 733 tgccaattgggaatggatcagcggaaagtaaatgtacttgccagagagtattgtgatgat 792
Query: 361 attaagaggaggaacaagcccattatcttatcacaccacatgttacctggcctacaacaa 420
|||||||||| |||||| || ||||||||||||||||||||||||||||| ||||| |||
Sbjct: 793 attaagaggaagaacaaaccaattatcttatcacaccacatgttacctggtctacagcaa 852
Query: 421 gggcaagacaagatgtcaaaaagtgacccatcatcatccgttttcatggaagatgaggag 480
|| ||||| |||||||| |||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 853 ggacaagagaagatgtctaaaagtgaccaatcatcagccgttttcatggaagatgaggag 912
Query: 481 gctgaggtgaatgtgaaaataaaaaaggcttattgcccgccaaaaattgtggaaggaaac 540
||||| |||||||||||||||||||||||||||||||| || || |||||||| ||||||
Sbjct: 913 gctgaagtgaatgtgaaaataaaaaaggcttattgcccacc-aagattgtggacggaaac 971
Query: 541 ccatgcttggagtacattaaatatcttatcttcccctggtttaatgagttcacagtggag 600
|||||||||||||||||||||||||| | | | |||||||||||||||||||| ||||||
Sbjct: 972 ccatgcttggagtacattaaatatctcacccttccctggtttaatgagttcacggtggag 1031
Query: 601 cgtaatgcagataatggtgggaataagacatttaaaagctctgaagagctggttgctgcc 660
||||||| |||||||||||| ||||||||||| |||||| ||||||||||| ||| | |
Sbjct: 1032 cgtaatgaagataatggtggaaataagacattccaaagctttgaagagctggctgccgac 1091
Query: 661 tatgaaagtggagagttacatccgggtgaccttaaaccagccttggcgaagtcattgaat 720
| ||||||||||||||||||||| | ||| ||||||||||| ||| ||||||||||||||
Sbjct: 1092 tttgaaagtggagagttacatcctgctgatcttaaaccagctttgtcgaagtcattgaat 1151
Query: 721 aaaattcttgagcctgtaagggaacacttcagaaaggacaacaatgctaaagagctgcta 780
|||||||| || |||||||||| |||||| |||| ||||| ||||||||||||||| |||
Sbjct: 1152 aaaattctggaccctgtaagggtacactttagaacggacagcaatgctaaagagctacta 1211
Query: 781 aaaagggtcaaggcttacaga 801
||||| |||||||||||||||
Sbjct: 1212 aaaagagtcaaggcttacaga 1232
>gnl|LJGI|TC58633 similar to UniRef100_P93363 Cluster: Tyrosyl-tRNA synthetase; n=1;
Nicotiana tabacum|Rep: Tyrosyl-tRNA synthetase -
Nicotiana tabacum (Common tobacco), partial (47%)
Length = 809
Score = 593 bits (299), Expect = e-169
Identities = 313/320 (97%)
Strand = Plus / Plus
Query: 1 atggggggagatttgaagaaaattgagattgtcggccgctatttgatcgaaatttggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atggggggagatttgaagaaaattgagattgtcggccgctatttgatcgaaatttggaaa 549
Query: 61 gctgttgggatggatctggaaggggggaaggttgagtttttgtggtcgtcgaaagagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gctgttgggatggatctggaaggggggaaggttgagtttttgtggtcgtcgaaagagatt 609
Query: 121 aacgctagagctcatgaatactggcctctagtgttggatatagctcagaagaacaacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aacgctagagctcatgaatactggcctctagtgttggatatagctcagaagaacaacctt 669
Query: 181 aaaaggattatcaggtgtagccaaataatggggcggggtgaacatgaagaattgactgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aaaaggattatcaggtgtagccaaataatggggcggggtgaacatgaagaattgactgct 729
Query: 241 gcacagatattctatccatgcatgcagtgtgctgacannnnnnncctcaaggctgacatt 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 730 gcacagatattctatccatgcatgcagtgtgctgacatttttttcctcaaggctgacatt 789
Query: 301 tgccaattaggaatggatca 320
||||||||||||||||||||
Sbjct: 790 tgccaattaggaatggatca 809