Miyakogusa Predicted Gene
- Lj5g3v0921280.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj5g3v0921280.1 CUFF.54260.1
(864 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58633 similar to UniRef100_P93363 Cluster: Tyrosyl-tR... 1259 0.0
gnl|LJGI|TC61989 similar to UniRef100_P93363 Cluster: Tyrosyl-tR... 789 0.0
gnl|LJGI|TC62206 similar to UniRef100_A7QIX2 Cluster: Chromosome... 204 7e-52
>gnl|LJGI|TC58633 similar to UniRef100_P93363 Cluster: Tyrosyl-tRNA synthetase; n=1;
Nicotiana tabacum|Rep: Tyrosyl-tRNA synthetase -
Nicotiana tabacum (Common tobacco), partial (47%)
Length = 809
Score = 1259 bits (635), Expect = 0.0
Identities = 649/656 (98%)
Strand = Plus / Plus
Query: 1 atggaaccatcacccgctgtggaagctctcgaatccgcctccgtctcagaccctgacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atggaaccatcacccgctgtggaagctctcgaatccgcctccgtctcagaccctgacact 213
Query: 61 gacaccacccaatcatccagttcaacgcctcagttgagcctcgagctgaggtttcagatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gacaccacccaatcatccagttcaacgcctcagttgagcctcgagctgaggtttcagatt 273
Query: 121 gtgagaagcgtcggggaagagtgcattcaagaagatgagctccttaatctccttgccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtgagaagcgtcggggaagagtgcattcaagaagatgagctccttaatctccttgccaac 333
Query: 181 aagcctgagcctgtttgctatgatggcttcgaaccctctggacgaatgcacattgctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aagcctgagcctgtttgctatgatggcttcgaaccctctggacgaatgcacattgctcag 393
Query: 241 ggtgtcatgaagacaatcaatgtgaataagctaacatctgcgggttgccgtgtcaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggtgtcatgaagacaatcaatgtgaataagctaacatctgcgggttgccgtgtcaaaata 453
Query: 301 tggattgctgattggtttgccaagctaaacaataaaatggggggagatttgaagaaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tggattgctgattggtttgccaagctaaacaataaaatggggggagatttgaagaaaatt 513
Query: 361 gagattgtcggccgctatttgatcgaaatttggaaagctgttgggatggatctggaaggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gagattgtcggccgctatttgatcgaaatttggaaagctgttgggatggatctggaaggg 573
Query: 421 gggaaggttgagtttttgtggtcgtcgaaagagattaacgctagagctcatgaatactgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gggaaggttgagtttttgtggtcgtcgaaagagattaacgctagagctcatgaatactgg 633
Query: 481 cctctagtgttggatatagctcagaagaacaaccttaaaaggattatcaggtgtagccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cctctagtgttggatatagctcagaagaacaaccttaaaaggattatcaggtgtagccaa 693
Query: 541 ataatggggcggggtgaacatgaagaattgactgctgcacagatattctatccatgcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ataatggggcggggtgaacatgaagaattgactgctgcacagatattctatccatgcatg 753
Query: 601 cagtgtgctgacannnnnnncctcaaggctgacatttgccaattaggaatggatca 656
||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 754 cagtgtgctgacatttttttcctcaaggctgacatttgccaattaggaatggatca 809
>gnl|LJGI|TC61989 similar to UniRef100_P93363 Cluster: Tyrosyl-tRNA synthetase; n=1;
Nicotiana tabacum|Rep: Tyrosyl-tRNA synthetase -
Nicotiana tabacum (Common tobacco), partial (85%)
Length = 1524
Score = 789 bits (398), Expect = 0.0
Identities = 580/643 (90%)
Strand = Plus / Plus
Query: 91 cagttgagcctcgagctgaggtttcagattgtgagaagcgtcggggaagagtgcattcaa 150
||||||| ||| |||| || ||||||||||||||||||| | || |||||||||||||||
Sbjct: 187 cagttgaccctggagcagaagtttcagattgtgagaagcattggagaagagtgcattcaa 246
Query: 151 gaagatgagctccttaatctccttgccaacaagcctgagcctgtttgctatgatggcttc 210
||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct: 247 gaagatgagctccttaaactcctggctaacaagcctgagcctgtttgctatgatggcttt 306
Query: 211 gaaccctctggacgaatgcacattgctcagggtgtcatgaagacaatcaatgtgaataag 270
|| |||||||||||||||||||||||||||||||||||||| |||| |||||||| |||
Sbjct: 307 gagccctctggacgaatgcacattgctcagggtgtcatgaaagcaattaatgtgaacaag 366
Query: 271 ctaacatctgcgggttgccgtgtcaaaatatggattgctgattggtttgccaagctaaac 330
||||| ||| | || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ctaacgtcttctggctgtcgtgtcaaaatatggattgctgattggtttgccaagctaaac 426
Query: 331 aataaaatggggggagatttgaagaaaattgagattgtcggccgctatttgatcgaaatt 390
||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 427 aataaaatgggtggagatttgaagaaaattgagattgttggccgctacttgattgaaatt 486
Query: 391 tggaaagctgttgggatggatctggaaggggggaaggttgagtttttgtggtcgtcgaaa 450
||||||||||||||||||||||| |||||||| || || |||||||| ||||| || |||
Sbjct: 487 tggaaagctgttgggatggatctagaagggggtaaagtcgagtttttatggtcatctaaa 546
Query: 451 gagattaacgctagagctcatgaatactggcctctagtgttggatatagctcagaagaac 510
||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 547 gagattaacgccagagctgatgaatactggcctcttgtgttggatatagctcagaagaat 606
Query: 511 aaccttaaaaggattatcaggtgtagccaaataatggggcggggtgaacatgaagaattg 570
|| |||||||| |||||||| ||||||||||||||||| ||| | ||||| || ||||||
Sbjct: 607 aatcttaaaagaattatcagatgtagccaaataatgggacggagcgaacaagacgaattg 666
Query: 571 actgctgcacagatattctatccatgcatgcagtgtgctgacannnnnnncctcaaggct 630
|||||||| || ||||||||||||||||||||||||||||||| ||| ||| ||
Sbjct: 667 actgctgctcaaatattctatccatgcatgcagtgtgctgacatatttttcctgaagact 726
Query: 631 gacatttgccaattaggaatggatcagaggaaagtgaatgtacttgccagagagtattgt 690
||||| |||||||| |||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 727 gacatctgccaattgggaatggatcagcggaaagtaaatgtacttgccagagagtattgt 786
Query: 691 gatgacattaagaggaggaacaagcccattatcttatcacacc 733
||||| |||||||||| |||||| || ||||||||||||||||
Sbjct: 787 gatgatattaagaggaagaacaaaccaattatcttatcacacc 829
Score = 61.9 bits (31), Expect = 6e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 813 acatgttacctggcctacaacaagggcaagacaagatgtcaaaaagtgacc 863
||||||||||||| ||||| ||||| ||||| |||||||| ||||||||||
Sbjct: 830 acatgttacctggtctacagcaaggacaagagaagatgtctaaaagtgacc 880
>gnl|LJGI|TC62206 similar to UniRef100_A7QIX2 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (45%)
Length = 854
Score = 204 bits (103), Expect = 7e-52
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 631 gacatttgccaattaggaatggatcagaggaaagtgaatgtacttgccagagagtattgt 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacatttgccaattaggaatggatcagaggaaagtgaatgtacttgccagagagtattgt 60
Query: 691 gatgacattaagaggaggaacaagcccattatcttatcacacc 733
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgacattaagaggaggaacaagcccattatcttatcacacc 103
Score = 103 bits (52), Expect = 2e-21
Identities = 52/52 (100%)
Strand = Plus / Plus
Query: 813 acatgttacctggcctacaacaagggcaagacaagatgtcaaaaagtgaccc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 acatgttacctggcctacaacaagggcaagacaagatgtcaaaaagtgaccc 155