Miyakogusa Predicted Gene

Lj5g3v0921010.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj5g3v0921010.1 Non Chatacterized Hit- tr|I1L2M9|I1L2M9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50387 PE,81.84,0,domain
in helicases and associated with SANT,HAS subgroup; DEAD-like
helicases superfamily,Helicase,,CUFF.54309.1
         (6054 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV776810 similar to UniRef100_A7PVV3 Cluster: Chromosom...   686   0.0  
gnl|LJGI|BP066683                                                     583   e-165

>gnl|LJGI|AV776810 similar to UniRef100_A7PVV3 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (9%)
          Length = 346

 Score =  686 bits (346), Expect = 0.0
 Identities = 346/346 (100%)
 Strand = Plus / Plus

                                                                        
Query: 3390 ctggaatcctgctatggatcaacaggctcaagatcggtgccacagaatcggtcagacacg 3449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctggaatcctgctatggatcaacaggctcaagatcggtgccacagaatcggtcagacacg 60

                                                                        
Query: 3450 tgaagttcatatctatagattgattagtgaaagcactattgaggagaatattttgaagaa 3509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tgaagttcatatctatagattgattagtgaaagcactattgaggagaatattttgaagaa 120

                                                                        
Query: 3510 agcaaatcagaagcgtgcacttgatgatctggttatacaaagtgggggttataatactga 3569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  agcaaatcagaagcgtgcacttgatgatctggttatacaaagtgggggttataatactga 180

                                                                        
Query: 3570 gttcttcaagaagcttgatcctatggaaatattttcaggtcatagaacactttcaattaa 3629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gttcttcaagaagcttgatcctatggaaatattttcaggtcatagaacactttcaattaa 240

                                                                        
Query: 3630 aaacacgccaaaggagaaaaaccagaacaatggagaagtttccgtaactaatgcagatgt 3689
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aaacacgccaaaggagaaaaaccagaacaatggagaagtttccgtaactaatgcagatgt 300

                                                          
Query: 3690 agaggctgcattaaaatatgttgaagatgaagcagattatatggca 3735
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  agaggctgcattaaaatatgttgaagatgaagcagattatatggca 346


>gnl|LJGI|BP066683 
          Length = 380

 Score =  583 bits (294), Expect = e-165
 Identities = 324/334 (97%)
 Strand = Plus / Minus

                                                                        
Query: 5721 atcttctgcaaagcaaaagtcggctgtttctgatttaactaagccgtctaggtcgaagtc 5780
            ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373  atcttctgccaagccaaagtcggctgtttctgatttaactaagccgtctaggtcgaagtc 314

                                                                        
Query: 5781 cagaaaagcttcgcttgatccaagtgaacatcatcaggccaggccattgttagagtcaat 5840
            | ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct: 313  ccgaaaagcttcgcttgatcccagtgaacatcatcaggccaggcccttgttagagtccat 254

                                                                        
Query: 5841 gccatcactgaaggatctgaggtttgatatgacttcgttctctacgggcgaatttggaat 5900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253  gccatcactgaaggatctgaggtttgatatgacttcgttctctacgggcgaatttggaat 194

                                                                        
Query: 5901 agatatggatagcaatctcccttttgatttgaatggggaaagttcatttgaaactgaaaa 5960
            ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193  agatatggatacccatctcccttttgatttgaatggggaaagttcatttgaaactgaaaa 134

                                                                        
Query: 5961 ttttgaagtggtcccacatggttatgtagatggtttaatctcaggccttgatgattgtac 6020
            ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133  ttttgaagtggtcccccctggttatgtagatggtttaatctcaggccttgatgattgtac 74

                                              
Query: 6021 agaatttcctgaatatactgacataagatagaac 6054
            ||||||||||||||||||||||||||||||||||
Sbjct: 73   agaatttcctgaatatactgacataagatagaac 40